CATH Domain: 2qvhA02 XML data for domain: 2qvhA02

Molscript image for 2qvhA02
2qvhA02
PDB coordinates for domain 2qvhA02

PDB 2qvh, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.120 Enolase superfamily Gene3D
3.20.20.120.15
3.20.20.120.15.1
3.20.20.120.15.1.1
3.20.20.120.15.1.1.1
3.20.20.120.15.1.1.1.1

Segment boundaries for domain 2qvhA02

Chopping figure for domain 2qvhA02
DomainStart PDB ResidueStop PDB Residue
2qvhA01 2 60
2qvhA01 286 312
2qvhA02 61 285

Structural Neighbourhood (23 entries)

There are 23 matching structural neighberhood comparisons for CATH ID 3.20.20.120.15.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 23 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2pgwA02 87.52 Sinorhizobium melilotiToluene and xylene degradationBenzoate degradation via hydroxylationMuconate cycloisomerase [EC:5.5.1.1]Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 215 26 91 1.91 2.08
2oqyA02 86.63 Muconate cycloisomeraseOceanobacillus iheyensis 3.20.20.120 226 20 92 2.04 2.20
1tkkA02 86.42 Bacillus subtilisL-Ala-D/L-Glu epimerase 3.20.20.120 244 26 90 2.28 2.52
2chrA02 85.57 Ralstonia eutropha JMP134Chloromuconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylation 3.20.20.120 202 24 85 1.91 2.23
2ovlA02 84.58 Toluene and xylene degradationStreptomyces coelicolorMandelate racemase [EC:5.1.2.2]Benzoate degradation via hydroxylationPutative racemase 3.20.20.120 223 20 91 2.43 2.67
1mdlA02 84.53 Mandelate racemasePseudomonas putida 3.20.20.120 230 16 92 2.54 2.76
2qddA02 84.44 Mandelate racemase/muconate lactonizing enzyme, putativeRoseovarius nubinhibens ISM 3.20.20.120 236 26 92 2.95 3.19
2pozH02 84.20 Putative dehydrataseMesorhizobium loti 3.20.20.120 246 20 87 2.90 3.30
1jpdX02 83.82 Racemase and epimerase activity, acting on amino acids and derivativesL-Ala-D/L-Glu epimeraseEscherichia coli K-12 3.20.20.120 207 23 88 2.88 3.26
2oz8A02 83.76 Mesorhizobium lotiMll7089 protein 3.20.20.120 230 20 88 2.29 2.58
2oqhA02 83.76 Putative isomeraseStreptomyces coelicolor 3.20.20.120 240 30 89 3.02 3.39
1yeyB02 83.70 Xanthomonas campestris pv. campestrisRTS beta protein 3.20.20.120 243 22 84 2.50 2.95
1ec7A02 83.60 Ascorbate and aldarate metabolismD-glucarate catabolic processGlucarate dehydratase activityGlucarate dehydrataseGlucarate dehydratase [EC:4.2.1.40] 3.20.20.120 261 20 81 2.26 2.77
3cb3A02 83.58 Toluene and xylene degradationPolaromonas sp. JS666Mandelate racemase [EC:5.1.2.2]Mandelate racemase/muconate lactonizing enzymeBenzoate degradation via hydroxylation 3.20.20.120 233 21 88 2.81 3.16
3cyjA02 83.54 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like proteinToluene and xylene degradationMandelate racemase [EC:5.1.2.2]Benzoate degradation via hydroxylation 3.20.20.120 235 19 88 2.37 2.66
2nqlA02 82.85 Agrobacterium tumefaciens str. C58Isomerase/lactonizing enzyme 3.20.20.120 214 18 91 2.90 3.17
3cawA02 82.74 Ubiquinone and other terpenoid-quinone biosynthesisO-succinylbenzoate synthase [EC:4.2.1.113]Bdellovibrio bacteriovorusMetabolic pathwaysPutative uncharacterized protein 3.20.20.120 225 18 90 3.17 3.51
2hzgA02 82.55 Rhodobacter sphaeroides 2.4.1Mandelate racemase/muconate lactonizing enzyme/Enolase superfamily 3.20.20.120 248 20 89 2.76 3.10
1r6wA01 81.79 Ubiquinone and other terpenoid-quinone biosynthesisMetabolic pathwaysMenaquinone biosynthetic processO-succinylbenzoate synthaseHydro-lyase activity 3.20.20.120 198 25 84 2.98 3.51
2qq6A02 81.67 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like protein 3.20.20.120 262 26 82 2.77 3.36
3go2A02 81.44 Burkholderia xenovorans LB400Putative uncharacterized protein 3.20.20.120 268 21 81 2.79 3.43
3bjsA02 80.90 Polaromonas sp. JS666Mandelate racemase/muconate lactonizing enzyme 3.20.20.120 250 21 86 2.70 3.12
2podB02 80.64 Mandelate racemase / muconate lactonizing enzymeBurkholderia pseudomallei 3.20.20.120 251 19 86 3.22 3.72
Displaying entries 1 to 23 (page 1 of 1)


Domain ATOM Sequence

>pdb|2qvhA02
GWPAPVRDTVPVNATVPAVGPEEAARIVASSGCTTAKVKVAERGQSEANDVARVEAVRDALGPRGRVRIDVNGAWDVDTA
VRIRLLDRFELEYVEQPCATVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLAEECG
LPVVVSSAVETSVGLAAGVALAAALPELPYACGLATLRLLHADVCDDPLLPVHGVLPVRRVDVS    

Domain COMBS Sequence

>pdb|2qvhA02
GWPAPVRDTVPVNATVPAVGPEEAARIVASSGCTTAKVKVAERGQSEANDVARVEAVRDALGPRGRVRIDVNGAWDVDTA
VRXIRLLDRFELEYVEQPCATVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLAEEC
GLPVVVSSAVETSVGLAAGVALAAALPELPYACGLATLRLLHADVCDDPLLPVHGVLPVRRVDVS    

Domain History Events (9)

Domain assigned by auto on 14 Feb 2008 17:56

Assigning to "3.20.20.120" based on similarity with "2opjA02"

Flow stage update by auto on 14 Feb 2008 17:55

No in_process hits for Domain "2qvhA02" ready to be processed

Update comment by auto on 14 Feb 2008 17:41

Domain "2qvhA02" hits Domain "2qvhB02" (99.5555555555556% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 22:06

Domain "2qvhA02" hits Domain "2opjA02" (99.5555555555556% over 100%) which is currently in process

Flow stage update by auto on 29 Nov 2007 21:53

Domain "2qvhA02" hits Domain "2opjA02" (99.5555555555556% over 100%) which is currently in process

Flow stage update by auto on 29 Nov 2007 21:52

NW result present for Domain "2qvhA02"

Flow stage update by auto on 24 Nov 2007 14:39

All required files are present for Domain "2qvhA02"

Flow stage update by auto on 24 Nov 2007 02:37

Beginning processing for Domain "2qvhA02"

Insertion by auto on 23 Nov 2007 18:28

Final ChopClose added based on similarity with "2opjA"