CATH Domain: 2qt6A01 XML data for domain: 2qt6A01

Molscript image for 2qt6A01
2qt6A01
PDB coordinates for domain 2qt6A01

PDB 2qt6, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.11
2.60.40.420.11.1
2.60.40.420.11.1.1
2.60.40.420.11.1.1.1
2.60.40.420.11.1.1.1.1

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Segment boundaries for domain 2qt6A01

Chopping figure for domain 2qt6A01
DomainStart PDB ResidueStop PDB Residue
2qt6A01 1 132
2qt6A02 133 308
2qt6A03 309 498

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.60.40.420.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1aozA01 91.87 L-ascorbate oxidaseCucurbita pepo var. melopepo 2.60.40.420 130 37 96 2.33 2.42
1kbvA01 83.61 Neisseria gonorrhoeaeCopper-containing nitrite reductase precursor 2.60.40.420 144 13 81 2.34 2.88
1gskA01 82.65 Sporulation and other development of resting stageBacillus subtilisSpore coat protein AChemical agent resistanceSpore coat protein A 2.60.40.420 167 16 73 1.93 2.64
1sddB01 82.14 Coagulation factor V precursorBos taurusCoagulation factor V (labile factor)Complement and coagulation cascades 2.60.40.420 156 13 71 3.33 4.64
1ibyA00 81.86 Chain A, Red Copper Protein NitrosocyaninNitrosomonas europaea 2.60.40.420 112 12 77 3.33 4.31
1fwxA02 80.17 Paracoccus denitrificansNitrous-oxide reductase precursor 2.60.40.420 121 10 72 2.75 3.78
1kdjA00 77.05 Identical protein bindingPlastocyaninDryopteris crassirhizoma 2.60.40.420 102 11 71 2.97 4.13
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2qt6A01
AVGPVADLTVTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPA
FINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2qt6A01
AVGPVADLTVTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPA
FINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDP
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 04 Dec 2007 02:34

Assigning to "2.60.40.420" based on similarity with "1kyaA01"

Flow stage update by auto on 04 Dec 2007 02:12

No in_process hits for Domain "2qt6A01" ready to be processed

Flow stage update by auto on 04 Dec 2007 02:12

NW result present for Domain "2qt6A01"

Flow stage update by auto on 25 Nov 2007 06:34

All required files are present for Domain "2qt6A01"

Flow stage update by auto on 24 Nov 2007 14:37

Beginning processing for Domain "2qt6A01"

Insertion by auto on 24 Nov 2007 14:08

Final ChopClose added based on similarity with "1kyaA"