CATH Domain: 2qn4A00 XML data for domain: 2qn4A00

Molscript image for 2qn4A00
2qn4A00
PDB coordinates for domain 2qn4A00

PDB 2qn4, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.80 Trefoil
2.80.10 Trefoil (Acidic Fibroblast Growth Factor, subunit A)
2.80.10.50 Gene3D
2.80.10.50.17
2.80.10.50.17.1
2.80.10.50.17.1.1
2.80.10.50.17.1.1.1
2.80.10.50.17.1.1.1.1

Segment boundaries for domain 2qn4A00

Chopping figure for domain 2qn4A00
DomainStart PDB ResidueStop PDB Residue
2qn4A00 1 172

Structural Neighbourhood (18 entries)

There are 18 matching structural neighberhood comparisons for CATH ID 2.80.10.50.17.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 18 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1avwB00 87.57 Glycine maxTrypsin inhibitor A 2.80.10.50 171 31 88 2.07 2.34
1wbaA00 85.98 Psophocarpus tetragonolobusAlbumin-1 2.80.10.50 171 24 88 2.58 2.92
1r8nA00 85.94 Kunitz-type serine protease inhibitor DrTIDelonix regiaSerine-type endopeptidase inhibitor activity 2.80.10.50 185 32 83 2.50 3.00
1jlxA01 80.43 Amaranthus caudatusAgglutinin 2.80.10.50 159 8 81 3.62 4.46
1jlxA02 79.43 Amaranthus caudatusAgglutinin 2.80.10.50 140 8 77 3.19 4.12
3iagC02 78.98 Transcription factor bindingHeart developmentRegulation of timing of cell differentiationDefense response to bacteriumNotch signaling pathway 2.80.10.50 155 4 74 3.68 4.92
1n4kA01 78.97 MicrosomeVoluntary musculoskeletal movementNucleolusPhosphoinositide bindingSarcoplasmic reticulum 2.80.10.50 141 9 73 2.71 3.68
1wd3A02 78.96 Alpha-L-arabinofuranosidase BAspergillus awamori 2.80.10.50 162 7 79 3.25 4.11
1t9fA00 78.81 Caenorhabditis elegansPutative uncharacterized protein 2.80.10.50 178 10 81 3.71 4.55
1a8dA02 78.43 Tetanus toxinTentoxilysin [EC:3.4.24.68]Clostridium tetani 2.80.10.50 206 12 72 3.05 4.19
1epwA04 77.46 Bontoxilysin [EC:3.4.24.69]Clostridium botulinumBotulinum neurotoxin type B 2.80.10.50 191 11 71 3.43 4.82
1w3fA01 77.28 Laetiporus sulphureusHemolytic lectin LSLa 2.80.10.50 147 9 79 3.81 4.77
1m2tB02 77.24 Beta-galactoside-specific lectin 1Viscum album 2.80.10.50 124 6 66 2.73 4.09
1dfcA01 76.79 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 122 10 68 3.18 4.64
1dfcA02 76.70 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 123 7 70 2.82 4.00
1dfcA04 76.05 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 107 11 62 2.52 4.01
1dfcA03 76.00 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 123 13 71 3.41 4.80
1xzzA00 75.60 MicrosomeNucleolusPhosphoinositide bindingVoluntary musculoskeletal movementSarcoplasmic reticulum 2.80.10.50 216 7 64 3.00 4.66
Displaying entries 1 to 18 (page 1 of 1)


Domain ATOM Sequence

>pdb|2qn4A00
APPPVYDTEGHELSADGSYYVLPASPGHGGGLTMAPRVLPCPLLVAQETDERRKGFPVRFTPWGGAAAPEDRTIRVSTDV
RIRFNAATICVQSTEWHVGRRVVTGPLGRENAFRVEKYGGGYKLVSCRDSCQDLGVSRDGARAWLGASQPPHVVVFKKA    

Domain COMBS Sequence

>pdb|2qn4A00
APPPVYDTEGHELSADGSYYVLPASPGHGGGLTMAPRVLPCPLLVAQETDERRKGFPVRFTPWGGAAAPEDRTIRVSTDV
RIRFNAATICVQSTEWHVGDEPLTGARRVVTGPLIGPSPSGRENAFRVEKYGGGYKLVSCRDSCQDLGVSRDGARAWLGA
SQPPHVVVFKKARPSPPE    

Domain History Events (8)

Domain assigned by auto on 27 Jul 2008 11:31

Assigning to "2.80.10.50" based on similarity with "2qn4B00"

Flow stage update by auto on 27 Jul 2008 11:30

No in_process hits for Domain "2qn4A00" ready to be processed

Update comment by auto on 27 Jul 2008 08:38

Domain "2qn4A00" hits Domain "2qn4B00" (100% over 100%) which is currently in process

Flow stage update by auto on 27 Jul 2008 08:22

Domain "2qn4A00" hits Domain "2qn4B00" (100% over 100%) which is currently in process

Flow stage update by auto on 27 Jul 2008 08:22

NW result present for Domain "2qn4A00"

Flow stage update by auto on 26 Jul 2008 11:49

All required files are present for Domain "2qn4A00"

Flow stage update by auto on 26 Jul 2008 11:49

Beginning processing for Domain "2qn4A00"

Insertion by auto on 25 Jul 2008 23:15

Final ChopClose added based on similarity with "2qn4B"