CATH Domain: 2qm3A01 XML data for domain: 2qm3A01

Molscript image for 2qm3A01
2qm3A01
PDB coordinates for domain 2qm3A01

PDB 2qm3, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.10 "winged helix" repressor DNA binding domain Gene3D
1.10.10.10.26
1.10.10.10.26.1
1.10.10.10.26.1.1
1.10.10.10.26.1.1.1
1.10.10.10.26.1.1.1.1

[top]
Segment boundaries for domain 2qm3A01

Chopping figure for domain 2qm3A01
DomainStart PDB ResidueStop PDB Residue
2qm3A01 0 82
2qm3A02 100 325

Structural Neighbourhood (108 entries)

There are 108 matching structural neighberhood comparisons for CATH ID 1.10.10.10.26.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 108 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2p8tA01 88.02 Pyrococcus horikoshiiPutative uncharacterized protein PH0730 1.10.10.10 75 18 81 2.02 2.48
1yg2A01 87.30 Vibrio cholerae pathogenic cycleVibrio choleraePadR family transcriptional regulator, regulatory protein AphAPutative uncharacterized protein 1.10.10.10 79 15 77 2.03 2.61
2dtrA01 86.23 DtxR family transcriptional regulator, Mn-dependent transcriptional regulatorDiphtheria toxin repressorCorynebacterium diphtheriae 1.10.10.10 71 16 76 2.25 2.94
3ctaA01 85.93 Riboflavin metabolismRiboflavin kinaseRiboflavin kinase, archaea type [EC:2.7.1.161]Thermoplasma acidophilum 1.10.10.10 84 12 75 2.28 3.04
1stzA01 85.32 Thermotoga maritimaHeat-inducible transcription repressor hrcAHeat-inducible transcriptional repressor 1.10.10.10 85 16 77 2.21 2.85
2f2eA01 85.30 Pseudomonas aeruginosaPutative uncharacterized protein 1.10.10.10 89 12 76 2.13 2.79
3b73A00 85.01 PhiH1 repressor-likeHaloarcula marismortui 1.10.10.10 86 11 77 3.01 3.86
1z05A01 84.60 Vibrio choleraeTranscriptional regulator, ROK family 1.10.10.10 72 8 70 2.39 3.40
1tbxB00 84.60 Sulfolobus virus 1Protein F-93 1.10.10.10 89 12 75 2.21 2.94
1ft9A02 84.54 Rhodospirillum rubrumCooA protein 1.10.10.10 79 8 72 2.24 3.08
1bjaA00 84.43 Transcription regulatory protein motAEnterobacteria phage T4 1.10.10.10 95 9 71 2.15 3.00
1p6rA00 84.03 Bacillus licheniformisPenicillinase repressor 1.10.10.10 82 7 80 3.98 4.94
2hgcA00 83.95 Bacillus subtilisUncharacterized protein yjcQ 1.10.10.10 78 16 77 2.16 2.78
2pg4A00 83.83 Aeropyrum pernixPutative uncharacterized protein 1.10.10.10 90 19 76 2.00 2.61
1ulyA01 83.45 Pyrococcus horikoshiiPutative uncharacterized protein PH1932 1.10.10.10 86 9 75 2.95 3.90
2jt1A00 83.36 PefI proteinSalmonella enterica subsp. enterica serovar Typhimurium 1.10.10.10 71 18 67 2.33 3.43
2ia2C01 83.29 Rhodococcus sp. DK17PcaR 1.10.10.10 60 16 67 2.10 3.09
1r1uB00 83.28 CzrA proteinStaphylococcus aureus 1.10.10.10 93 8 75 2.40 3.19
2hztC00 83.27 Bacillus subtilisUncharacterized HTH-type transcriptional regulator ytcD 1.10.10.10 88 12 76 2.48 3.26
1lvaA01 83.22 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica 1.10.10.10 59 10 61 2.23 3.61
2ia2D01 83.17 Rhodococcus sp. DK17PcaR 1.10.10.10 57 17 65 2.76 4.22
1w1wE00 83.17 Nuclear mitotic cohesin complexProtein acetylationChromatin bindingCohesin complex subunit SCC1Establishment of mitotic sister chromatid cohesion 1.10.10.580 70 4 67 2.55 3.76
1dpuA00 83.17 DNA-dependent DNA replicationReplication protein A 32 kDa subunitNucleotide excision repairDNA replicationReplication factor A2 1.10.10.10 69 11 72 2.10 2.88
2hr3D02 83.14 Probable transcriptional regulatorPseudomonas aeruginosa 1.10.10.10 61 16 65 2.26 3.45
1qbjC00 83.10 CytoplasmNucleolusHomo sapiensDouble-stranded RNA-specific adenosine deaminaseBase conversion or substitution editing 1.10.10.10 66 13 69 2.54 3.67
2fswA00 83.07 Porphyromonas gingivalisPutative uncharacterized protein 1.10.10.10 99 8 68 2.28 3.32
1ub9A00 83.00 Pyrococcus horikoshiiPutative uncharacterized protein PH1061 1.10.10.10 100 11 69 2.49 3.61
2o0yB01 82.93 Rhodococcus jostii RHA1Transcriptional regulator 1.10.10.10 64 14 71 2.73 3.81
1hstA00 82.81 Histone H1/5Gallus gallusHistone H5 1.10.10.10 74 9 67 2.66 3.92
2heoA00 82.75 Mus musculusLeft-handed Z-DNA bindingZ-DNA-binding protein 1 1.10.10.10 59 11 65 2.06 3.15
1t6sB02 82.53 Chlorobaculum tepidumSegregation and condensation protein BSegregation and condensation protein B 1.10.10.10 77 14 80 3.79 4.72
1lvaA03 82.49 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica 1.10.10.10 62 4 67 2.80 4.12
1sfuA00 82.47 Yaba-like disease virus34L protein 1.10.10.10 70 8 74 3.47 4.68
3bz6A01 82.45 Hypothetical proteinPseudomonas syringae pv. tomatoUPF0502 protein PSPTO_2686 1.10.10.10 88 7 69 2.64 3.81
3df8A00 82.43 Thermoplasma volcanium GSS1Putative uncharacterized protein TVG1336486 1.10.10.10 94 12 68 2.51 3.69
2fokA02 82.34 Planomicrobium okeanokoitesType-2 restriction enzyme FokI 1.10.10.10 82 11 78 3.18 4.07
1q1hA00 82.23 Sulfolobus solfataricusTranscription initiation factor TFIIE alpha subunitTranscription factor EBasal transcription factors 1.10.10.10 85 14 71 2.81 3.92
3jthB00 82.19 Transcription activator HlyUVibrio vulnificus 1.10.10.10 88 11 75 2.60 3.47
1cf7B00 82.13 Protein domain specific bindingTranscription factor Dp-2Transcription cofactor activityHomo sapiens 1.10.10.10 82 9 71 2.93 4.07
2fnaA03 81.94 Sulfolobus solfataricusPutative uncharacterized protein 1.10.10.10 72 8 77 2.83 3.64
3elkB00 81.75 Putative uncharacterized protein Ta0346Thermoplasma acidophilum 1.10.10.10 98 9 68 3.06 4.48
3cuqB03 81.60 Homo sapiensVacuolar protein-sorting-associated protein 36ESCRT-II complex subunit VPS36Endocytosis 1.10.10.10 69 13 75 3.30 4.38
1hw5A02 81.53 TranscriptionTranscription activator activityTranscription repressor activityCRP/FNR family transcriptional regulator, cyclic AMP receptor proteinCatabolite gene activator 1.10.10.10 68 8 62 2.14 3.40
1ldjA06 81.45 Cullin-1Cell cycle arrestInduction of apoptosis by intracellular signalsUbiquitin mediated proteolysisWnt signaling pathway 1.10.10.10 68 13 62 2.03 3.22
1jhfA02 81.40 Repressor LexA [EC:3.4.21.88]TranscriptionDNA bindingLexA repressorTranscription repressor activity 1.10.10.10 69 10 69 2.50 3.62
1jftA01 81.31 LacI family transcriptional regulator, purine nucleotide synthesis repressorHTH-type transcriptional repressor purREscherichia coli K-12 1.10.260.40 57 17 61 2.25 3.65
2jtvA00 81.22 Rhodopseudomonas palustrisPutative uncharacterized protein 1.10.10.10 65 13 72 3.41 4.68
1s3jA02 81.19 Bacillus subtilisUncharacterized HTH-type transcriptional regulator yusO 1.10.10.10 62 12 62 2.50 3.97
1r1tA00 81.05 Transcriptional repressor smtBSynechococcus elongatus PCC 7942 1.10.10.10 98 13 70 2.63 3.74
1u5tB02 80.93 Protein targeting to vacuoleVacuolar protein-sorting-associated protein 36Protein retention in Golgi apparatusUbiquitin bindingEndocytosis 1.10.10.10 69 7 66 2.31 3.46
2hoeA01 80.84 Thermotoga maritimaTranscriptional regulator, XylR-related 1.10.10.10 57 14 60 1.81 2.99
1lvaA04 80.67 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica 1.10.10.10 60 8 65 2.10 3.21
2w25A01 80.65 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis 1.10.10.10 52 9 60 3.01 4.98
3h92A00 80.46 Methanocaldococcus jannaschiiUncharacterized ATP-binding protein MJECL15 1.10.10.10 85 8 74 2.84 3.83
1ku9A01 80.46 DNA-binding protein MJ1563Methanocaldococcus jannaschii 1.10.10.10 83 14 69 2.90 4.15
2eshA00 80.39 Thermotoga maritimaPutative uncharacterized protein 1.10.10.10 114 13 63 3.10 4.91
1yyvB00 80.32 Putative transcriptional regulatorSalmonella enterica subsp. enterica serovar Typhimurium 1.10.10.10 107 13 62 2.71 4.33
3cuqA02 80.27 ESCRT-II complex subunit VPS22Transcription factor bindingRegulation of transcription from RNA polymerase II promoterHomo sapiensVacuolar-sorting protein SNF8 1.10.10.10 81 7 71 3.29 4.59
2p5vA01 80.14 Neisseria meningitidis serogroup BTranscriptional regulator, AsnC familyLrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein 1.10.10.10 52 9 60 2.93 4.84
1a04A02 80.14 Two-component systemTwo-component system, NarL family, nitrate/nitrite response regulator NarLProtein bindingEscherichia coli K-12Nitrate/nitrite response regulator protein narL 1.10.10.10 80 5 76 3.62 4.73
2ijlB00 80.07 Agrobacterium tumefaciens str. C58Molybdenum-binding transcriptional repressorMolybdate transport system regulatory protein 1.10.10.10 103 12 67 2.97 4.37
2pn6A01 80.00 150aa long hypothetical transcriptional regulatorSulfolobus tokodaii 1.10.10.10 52 9 60 2.77 4.58
1j5yA01 79.90 Thermotoga maritimaTranscriptional regulator, biotin repressor family 1.10.10.10 64 14 71 3.38 4.72
1lvaA02 79.81 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica 1.10.10.10 69 14 65 2.45 3.74
1lddA00 79.67 Mitotic sister chromatid segregationProtein ubiquitinationCyclin catabolic processMeiosis - yeastAnaphase-promoting complex subunit 2 1.10.10.10 74 6 67 2.37 3.49
1fnnB03 79.58 Pyrobaculum aerophilumCell division control protein 6 (Cdc6), putativeArchaeal cell division control protein 6 1.10.10.10 103 12 64 2.86 4.46
1biaA01 79.52 Biotin metabolismDNA bindingBirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]Bifunctional protein birABiotin-[acetyl-CoA-carboxylase] ligase activity 1.10.10.10 64 10 71 3.05 4.26
3i53B01 79.49 O-methyltransferaseStreptomyces carzinostaticus subsp. neocarzinostaticus 1.10.10.10 91 16 74 3.08 4.12
3cloA02 79.48 Bacteroides thetaiotaomicronTranscriptional regulator 1.10.10.10 63 9 76 3.51 4.59
1yioA02 79.41 Response regulatory proteinPseudomonas fluorescens 1.10.10.10 59 8 71 3.58 5.00
2r3sB01 79.11 1.10.10.10 76 10 74 3.09 4.17
3fm5A00 78.60 Rhodococcus jostii RHA1Transcriptional regulator 1.10.10.10 124 13 51 2.21 4.28
1je8E00 78.53 Two-component systemEscherichia coli O157:H7Two-component system, NarL family, nitrate/nitrite response regulator NarLNitrate/nitrite response regulator protein narL 1.10.10.10 64 6 75 3.63 4.82
1xd7A00 78.24 Bacillus subtilisPutative HTH-type transcriptional regulator ywnA 1.10.10.10 116 11 55 2.30 4.17
2nyxB01 78.05 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEINMycobacterium tuberculosis 1.10.10.10 140 9 47 2.03 4.24
2fbiA00 78.03 Probable transcriptional regulatorPseudomonas aeruginosa 1.10.10.10 136 14 50 2.21 4.42
1jgsA00 78.00 Multiple antibiotic resistance protein marRMarR family transcriptional regulatorEscherichia coli K-12 1.10.10.10 138 16 49 1.96 3.98
3fxrA01 77.99 LysR type regulator of tsaMBCDComamonas testosteroni 1.10.10.10 92 9 68 2.60 3.80
3cjnA00 77.94 Ruegeria pomeroyiTranscriptional regulator, MarR family 1.10.10.10 139 17 48 2.04 4.23
1ixcA01 77.91 LysR-type regulatory proteinCupriavidus necator 1.10.10.10 79 10 77 3.82 4.91
2nnnC00 77.90 Probable transcriptional regulatorPseudomonas aeruginosa 1.10.10.10 131 9 51 2.30 4.50
1b4aA01 77.86 Geobacillus stearothermophilusArginine repressor 1.10.10.10 59 8 55 2.16 3.89
1uxdA00 77.66 LacI family transcriptional regulator, fructose operon transcriptional repressorFructose repressorEscherichia coli K-12 1.10.260.40 59 11 62 2.86 4.54
1oyiA00 77.53 Vaccinia virusDouble-stranded RNA-binding protein 1.10.10.10 62 14 65 2.79 4.26
2esnA01 77.52 Probable transcriptional regulatorPseudomonas aeruginosa 1.10.10.10 89 7 77 3.61 4.66
1hsjA03 77.52 Staphylococcus aureus subsp. aureus NCTC 8325HTH-type transcriptional regulator sarR 1.10.10.10 82 11 59 2.36 3.95
3e6mA00 77.42 Ruegeria pomeroyiTranscriptional regulator, MarR family 1.10.10.10 145 17 45 1.94 4.26
1fp1D01 77.32 Medicago sativaIsoliquiritigenin 2'-O-methyltransferase 1.10.10.10 105 9 61 3.00 4.85
3bwgB01 77.22 GntR family transcriptional regulator, transcriptional regulator of bglABacillus subtilisUncharacterized HTH-type transcriptional regulator yydK 1.10.10.10 68 10 67 3.16 4.65
1w0tA00 77.21 Protein homooligomerizationPositive regulation of mitotic cell cycleTelomere maintenance via telomere shorteningNegative regulation of telomerase activityG2/M transition of mitotic cell cycle 1.10.10.60 52 9 56 2.37 4.17
1bbyA00 77.09 Basal transcription factorsGeneral transcription factor IIF subunit 2General RNA polymerase II transcription factor activityHomo sapiensTranscription initiation factor TFIIF beta subunit 1.10.10.10 69 11 71 3.22 4.50
3fzvB01 77.07 Probable transcriptional regulatorPseudomonas aeruginosa 1.10.10.10 76 5 79 3.73 4.72
1b9mB01 76.99 Transcriptional regulator modEMolybdate transport system regulatory proteinEscherichia coli K-12 1.10.10.10 97 9 68 3.24 4.76
3bj6B00 76.98 Ruegeria pomeroyiTranscriptional regulator, MarR family 1.10.10.10 148 9 45 2.05 4.53
3cdhA00 76.96 Ruegeria pomeroyiTranscriptional regulator, MarR family 1.10.10.10 129 20 50 2.31 4.58
2fbhA00 76.95 Probable transcriptional regulatorPseudomonas aeruginosaMarR family transcriptional regulator, transcriptional regulator for hemolysin 1.10.10.10 137 14 49 2.20 4.43
2a61B00 76.70 Thermotoga maritimaTranscriptional regulator, MarR family 1.10.10.10 136 16 49 2.44 4.95
2rdpA00 76.65 Geobacillus stearothermophilusPutative transcriptional regulator MarR 1.10.10.10 135 13 48 2.31 4.72
1lj9B00 76.46 Enterococcus faecalisTranscriptional regulator, MarR family 1.10.10.10 142 13 46 2.08 4.48
2fxaA00 76.41 Bacillus subtilisMarR family transcriptional regulator, protease production regulatory protein HPrHTH-type transcriptional regulator hpr 1.10.10.10 147 17 44 2.10 4.68
3boqA00 75.95 Ruegeria pomeroyiTranscriptional regulator, MarR family 1.10.10.10 131 9 50 2.48 4.92
1t56A01 75.89 TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN (TETR-FAMILY) ETHRMycobacterium tuberculosis 1.10.10.60 46 6 45 1.96 4.29
2fq4A01 75.88 Transcriptional regulator, TetR familyBacillus cereus ATCC 14579 1.10.10.60 47 8 46 2.16 4.60
3bjaA00 75.61 Bacillus cereus ATCC 10987Transcriptional regulator, MarR family, putative 1.10.10.10 130 18 48 2.40 4.95
1uaaA02 74.41 ATP-dependent DNA helicase Rep [EC:3.6.1.-]ATP-dependent DNA helicase repEscherichia coli K-12 1.10.10.160 74 6 72 3.59 4.93
1s6lA01 73.01 Alkylmercury lyaseEscherichia coli 1.10.10.10 52 11 58 2.75 4.74
3ccyA01 73.00 Bordetella parapertussisPutative TetR-family transcriptional regulator 1.10.10.60 44 13 44 1.97 4.43
2raeA01 71.34 Rhodococcus jostii RHA1Transcriptional regulator, AcrR family protein 1.10.10.60 43 2 41 1.52 3.62
[1]
Displaying entries 1 to 108 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2qm3A01
AKEIVERVKTKTKIPVYERSVENVLSAVLASDDIWRIVDLSEEPLPLVVAILESLNELGYVTFEDGVKLTEKGEELVAEY
GI
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2qm3A01
AXKEIVERVKTKTKIPVYERSVENVLSAVLASDDIWRIVDLSEEPLPLVVAILESLNELGYVTFEDGVKLTEKGEELVAE
YGI
BLAST against CATH

[top]
Domain History Events (83)

Domain assigned by cuff on 16 Mar 2009 17:49

same superfamily

Domain assignment manual match h by cuff on 16 Mar 2009 17:47

same superfamily

Homcheck allotment by cuff on 16 Mar 2009 17:45

User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by cuff on 16 Mar 2009 17:45

User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by auto on 16 Mar 2009 06:13

Domain "2qm3A01" SCOP scan with no results - no SCOP mapping

Domain scan scop cath by auto on 16 Mar 2009 06:12

Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2qm3A01

Flow stage update by auto on 16 Mar 2009 02:40

Retrieved PRC_PFAMCATH results for job ID SID9587768227116274 and results inserted.

Domain scan prc pfamcath by auto on 16 Mar 2009 02:39

Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 63 results for 2qm3A01

Update comment by auto on 13 Mar 2009 22:25

PRC_PFAMCATH job SID9587768227116274 is not yet finished.

Prc pfamcath submit by auto on 13 Mar 2009 22:22

The entry "2qm3A01" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 13 Mar 2009 22:22

The entry "2qm3A01" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 13 Mar 2009 22:07

Retrieved SSAP results for job ID SID6690895716084152 and results inserted.

Domain scan ssap cath by auto on 13 Mar 2009 22:04

Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 3465 results for 2qm3A01

Update comment by auto on 10 Mar 2009 02:29

SSAP job SID6690895716084152 is not yet finished.

Ssap cath submit by auto on 10 Mar 2009 02:15

The entry "2qm3A01" has been submitted to the SSAP webservice.

Flow stage update by auto on 10 Mar 2009 02:15

The entry "2qm3A01" has been submitted to the SSAP webservice.

Flow stage update by auto on 10 Mar 2009 01:04

Retrieved PRC results for job ID SID0611793434342320 and inserted them into the database.

Domain scan prc cath by auto on 10 Mar 2009 01:03

Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 2 results for 2qm3A01

Update comment by auto on 09 Mar 2009 19:54

PRC job SID0611793434342320 is not yet finished.

Prc cath submit by auto on 09 Mar 2009 19:34

The entry "2qm3A01" has been submitted to the PRC webservice.

Flow stage update by auto on 09 Mar 2009 19:34

The entry "2qm3A01" has been submitted to the PRC webservice.

Flow stage update by auto on 09 Mar 2009 18:30

Retrieved HMM(SAM) results for job ID SID2499754056781344 and inserted them into the database.

Domain scan sam cath by auto on 09 Mar 2009 18:29

Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2qm3A01

Update comment by auto on 04 Mar 2009 16:06

HMM(SAM) job SID2499754056781344 is not yet finished.

Flow stage update by auto on 04 Mar 2009 15:54

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 04 Mar 2009 15:54

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 04 Mar 2009 12:33

Unable to retrieve "2qm3A01" HMM(SAM) results for job "SID5933783843348896"

Update comment by auto on 04 Mar 2009 04:08

HMM(SAM) job SID5933783843348896 is not yet finished.

Flow stage update by auto on 04 Mar 2009 03:55

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 04 Mar 2009 03:55

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 04 Mar 2009 00:32

Unable to retrieve "2qm3A01" HMM(SAM) results for job "SID7096484618792224"

Sam cath submit by auto on 03 Mar 2009 23:23

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 03 Mar 2009 23:23

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 19 Feb 2009 15:45

Unable to retrieve "2qm3A01" HMM(SAM) results for job "SID4192180958694272"

Update comment by auto on 19 Feb 2009 08:29

HMM(SAM) job SID4192180958694272 is not yet finished.

Flow stage update by auto on 19 Feb 2009 07:59

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 19 Feb 2009 07:59

The entry "2qm3A01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 19 Feb 2009 07:06

Retrieved "2qm3A01" CATHEDRAL results for job ID SID0463044851427440 and inserted them into the database.

Domain scan cathedral cath by auto on 19 Feb 2009 07:06

Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 70 results for 2qm3A01

Cathedral cath submit by auto on 19 Feb 2009 06:16

The entry "2qm3A01" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 19 Feb 2009 06:16

The entry "2qm3A01" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 27 Jan 2009 11:53

Unable to retrieve "2qm3A01" CATHEDRAL results for job "SID1664413832620824"

Update comment by auto on 22 Jan 2009 17:04

"2qm3A01" CATHEDRAL job SID1664413832620824 is not yet finished.

Flow stage update by auto on 22 Jan 2009 16:24

The entry "2qm3A01" has been submitted to the CATHEDRAL webservice.

Cathedral cath submit by auto on 22 Jan 2009 16:24

The entry "2qm3A01" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 21 Dec 2008 14:47

ScanList with 12830 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2qm3A01.scanlist" for "2qm3A01"

Write scan list by auto on 21 Dec 2008 14:47

Writing ScanList containing 12830 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2qm3A01.scanlist" for domain "2qm3A01"

Update comment by auto on 21 Dec 2008 11:52

Waiting for 76 new domains (example : 3davB00) to be processed so that they can be scanned against too.

Update comment by auto on 20 Dec 2008 20:41

Waiting for 113 new domains (example : 3bmkB00) to be processed so that they can be scanned against too.

Update comment by auto on 20 Dec 2008 19:04

Waiting for 148 new domains (example : 3bllA00) to be processed so that they can be scanned against too.

Update comment by auto on 20 Dec 2008 14:35

Waiting for 197 new domains (example : 2vmtA02) to be processed so that they can be scanned against too.

Update comment by auto on 20 Dec 2008 11:35

Waiting for 239 new domains (example : 2jknF00) to be processed so that they can be scanned against too.

Update comment by auto on 20 Dec 2008 07:49

Waiting for 256 new domains (example : 2jkjA00) to be processed so that they can be scanned against too.

Update comment by auto on 20 Dec 2008 03:58

Waiting for 248 new domains (example : 2jkjA00) to be processed so that they can be scanned against too.

Update comment by auto on 20 Dec 2008 00:49

Waiting for 246 new domains (example : 2jkjA00) to be processed so that they can be scanned against too.

Update comment by auto on 19 Dec 2008 20:42

Waiting for 197 new domains (example : 2jkjA00) to be processed so that they can be scanned against too.

Update comment by auto on 19 Dec 2008 16:55

Waiting for 189 new domains (example : 2jkjA00) to be processed so that they can be scanned against too.

Update comment by auto on 19 Dec 2008 11:34

Waiting for 32 new domains (example : 2jknA00) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 23:33

Waiting for 2 new domains (example : 3fcxA00) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 22:12

Waiting for 27 new domains (example : 3ex7B00) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 17:37

Waiting for 80 new domains (example : 2zecD01) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 14:52

Waiting for 132 new domains (example : 2zebD01) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 11:32

Waiting for 174 new domains (example : 2zebD01) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 09:47

Waiting for 227 new domains (example : 2w42B01) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 04:24

Waiting for 270 new domains (example : 2rklB00) to be processed so that they can be scanned against too.

Update comment by auto on 17 Dec 2008 00:27

Waiting for 285 new domains (example : 2jldA01) to be processed so that they can be scanned against too.

Update comment by auto on 16 Dec 2008 20:35

Waiting for 267 new domains (example : 2jldA01) to be processed so that they can be scanned against too.

Update comment by auto on 16 Dec 2008 18:32

Waiting for 261 new domains (example : 2jldA01) to be processed so that they can be scanned against too.

Update comment by auto on 16 Dec 2008 14:43

Waiting for 215 new domains (example : 2jldA01) to be processed so that they can be scanned against too.

Update comment by auto on 16 Dec 2008 10:54

Waiting for 201 new domains (example : 2jldA01) to be processed so that they can be scanned against too.

Update comment by auto on 15 Dec 2008 20:40

Waiting for 150 new domains (example : 2jldA01) to be processed so that they can be scanned against too.

Update comment by auto on 15 Dec 2008 17:13

Waiting for 297 new domains (example : 2r6gG01) to be processed so that they can be scanned against too.

Update comment by auto on 14 Dec 2008 20:41

Waiting for 337 new domains (example : 2r6gG01) to be processed so that they can be scanned against too.

Update comment by auto on 14 Dec 2008 17:18

Waiting for 547 new domains (example : 2r6gG01) to be processed so that they can be scanned against too.

Update comment by auto on 13 Dec 2008 20:37

Waiting for 598 new domains (example : 2r6gG01) to be processed so that they can be scanned against too.

Update comment by auto on 13 Dec 2008 16:50

Waiting for 852 new domains (example : 2r6gG01) to be processed so that they can be scanned against too.

Update comment by auto on 12 Dec 2008 20:55

Waiting for 902 new domains (example : 2r6gG01) to be processed so that they can be scanned against too.

Flow stage update by auto on 12 Dec 2008 20:52

No satisfactory AssignClose result found.

Flow stage update by auto on 12 Dec 2008 20:36

No in_process hits for Domain "2qm3A01" ready to be processed

Flow stage update by auto on 12 Dec 2008 20:35

NW result present for Domain "2qm3A01"

Flow stage update by auto on 10 Dec 2008 14:15

All required files are present for Domain "2qm3A01"

Flow stage update by auto on 10 Dec 2008 14:14

Beginning processing for Domain "2qm3A01"

Insertion by cuff on 08 Dec 2008 12:31

nice chopping