CATH Domain: 2qj2A01 XML data for domain: 2qj2A01

Molscript image for 2qj2A01
2qj2A01
PDB coordinates for domain 2qj2A01

PDB 2qj2, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.50 3-Layer(bba) Sandwich
3.50.4 Hepatocyte Growth Factor
3.50.4.10 Hepatocyte Growth Factor Gene3D
3.50.4.10.1
3.50.4.10.1.1
3.50.4.10.1.1.1
3.50.4.10.1.1.1.1
3.50.4.10.1.1.1.1.2

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Segment boundaries for domain 2qj2A01

Chopping figure for domain 2qj2A01
DomainStart PDB ResidueStop PDB Residue
2qj2A01 36 125
2qj2A02 126 209

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.50.4.10.1.1.1.1.2 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1i8nA00 83.51 Haementeria officinalisAnti-platelet protein 3.50.4.10 89 7 93 3.91 4.19
1hkyA00 79.41 Eimeria tenellaMicroneme protein 5 3.50.4.10 86 9 83 3.93 4.71
1gmnB01 72.67 Pathways in cancerHepatocyte growth factorEpithelial to mesenchymal transitionRenal cell carcinomaCytokine-cytokine receptor interaction 3.50.4.10 29 100 31 0.53 1.66
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2qj2A01
RNTIHEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSSGVKKEFGHE
FDLYENKDYI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2qj2A01
GSYAEGQRKRRNTIHEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMS
SGVKKEFGHEFDLYENKDYI
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Nov 2007 06:43

Assigning to "3.50.4.10" based on similarity with "1nk1A01"

Flow stage update by auto on 29 Nov 2007 06:19

No in_process hits for Domain "2qj2A01" ready to be processed

Flow stage update by auto on 29 Nov 2007 06:19

NW result present for Domain "2qj2A01"

Flow stage update by auto on 24 Nov 2007 14:38

All required files are present for Domain "2qj2A01"

Flow stage update by auto on 24 Nov 2007 02:37

Beginning processing for Domain "2qj2A01"

Insertion by auto on 23 Nov 2007 18:26

Final ChopClose added based on similarity with "1nk1A"