CATH Domain: 2qisA00 XML data for domain: 2qisA00

Molscript image for 2qisA00
2qisA00
PDB coordinates for domain 2qisA00

PDB 2qis, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.600 Farnesyl Diphosphate Synthase
1.10.600.10 Farnesyl Diphosphate Synthase Gene3D
1.10.600.10.1
1.10.600.10.1.1
1.10.600.10.1.1.1
1.10.600.10.1.1.1.1
1.10.600.10.1.1.1.1.1

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Segment boundaries for domain 2qisA00

Chopping figure for domain 2qisA00
DomainStart PDB ResidueStop PDB Residue
2qisA00 22 363

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.600.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wy0A00 82.15 Dimethylallyltranstransferase [EC:2.5.1.1]Terpenoid backbone biosynthesisPyrococcus horikoshiiGeranyltranstransferase [EC:2.5.1.10]Metabolic pathways 1.10.600.10 327 20 92 3.41 3.71
2h8oA00 79.38 Terpenoid backbone biosynthesisMetabolic pathwaysAgrobacterium tumefaciens str. C58GeranyltranstransferaseGeranyltranstransferase [EC:2.5.1.10] 1.10.600.10 278 18 77 3.21 4.16
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2qisA00
DVYAQEKQDFVQHFSQIVRVLTEDEHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVG
WCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEI
GQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKSAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLF
GDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALI
EQYAAPLPPAVFLGLARKIY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2qisA00
DVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWT
VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQT
EIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKSAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLD
LFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMA
LIEQYAAPLPPAVFLGLARKIYKRRK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Aug 2007 06:28

Assigning to "1.10.600.10" based on similarity with "2f7mF00"

Flow stage update by auto on 29 Aug 2007 06:13

No in_process hits for Domain "2qisA00" ready to be processed

Flow stage update by auto on 29 Aug 2007 06:13

NW result present for Domain "2qisA00"

Flow stage update by auto on 19 Aug 2007 10:13

All required files are present for Domain "2qisA00"

Flow stage update by auto on 17 Aug 2007 02:51

Beginning processing for Domain "2qisA00"

Insertion by auto on 17 Aug 2007 02:12

Final ChopClose added based on similarity with "2f7mF"