CATH Domain: 2qdxA02 XML data for domain: 2qdxA02

Molscript image for 2qdxA02
2qdxA02
PDB coordinates for domain 2qdxA02

PDB 2qdx, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.80 Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module Gene3D
3.40.50.80.1
3.40.50.80.1.1
3.40.50.80.1.1.1
3.40.50.80.1.1.1.1
3.40.50.80.1.1.1.1.1

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Segment boundaries for domain 2qdxA02

Chopping figure for domain 2qdxA02
DomainStart PDB ResidueStop PDB Residue
2qdxA01 2 96
2qdxA02 97 258

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 3.40.50.80.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1fdrA02 89.00 Fructose catabolic processCytoplasmResponse to drugFerredoxin--NADP+ reductase [EC:1.18.1.2]Ferredoxin--NADP reductase 3.40.50.80 152 30 91 1.82 1.98
1krhA03 83.57 Benzoate 1,2-dioxygenase electron transfer componentAcinetobacter sp. ADP1 3.40.50.80 134 23 81 2.94 3.61
2rc5A02 83.43 Leptospira interrogansFerredoxin--NADP reductase 3.40.50.80 161 14 85 3.32 3.87
1umkA02 82.96 Amino sugar and nucleotide sugar metabolismHemoglobin complexNADH-cytochrome b5 reductase 3Cytochrome-b5 reductase [EC:1.6.2.2]Homo sapiens 3.40.50.80 154 16 81 2.92 3.58
1f20A01 82.68 Response to heatNegative regulation of insulin secretionSynapseAmino acid bindingNuclear membrane 3.40.50.80 163 15 84 3.37 3.98
1qfjA02 82.03 Porphyrin and chlorophyll metabolismAquacobalamin reductase / NAD(P)H-flavin reductase [EC:1.16.1.3 1.5.1.29]NAD(P)H-flavin reductaseEscherichia coli K-12 3.40.50.80 135 11 80 3.22 3.98
1ja1A04 81.68 Rattus norvegicusNitric oxide catabolic processMicrosomeCellular response to peptide hormone stimulusNADPH-ferrihemoprotein reductase [EC:1.6.2.4] 3.40.50.80 158 12 84 3.86 4.56
1ep3B02 80.70 Lactococcus lactis subsp. cremoris MG1363Dihydroorotate dehydrogenase electron transfer subunitProtein bindingDihydroorotate dehydrogenase electron transfer subunit 3.40.50.80 117 15 72 2.79 3.86
1cqxA03 80.69 Nitric oxide dioxygenase [EC:1.14.12.17]Ralstonia eutropha H16Flavohemoprotein 3.40.50.80 142 16 80 3.46 4.28
2piaA02 79.65 Burkholderia cepaciaPhthalate dioxygenase reductase 3.40.50.80 121 14 74 3.47 4.68
2r6hA02 79.32 Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:1.6.5.-]Porphyromonas gingivalisNADH:ubiquinone oxidoreductase, Na translocating, F subunit 3.40.50.80 114 14 64 2.79 4.30
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2qdxA02
GTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKLIY
YPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSFGLKISPRMGEPGDYLIERAFV
EK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2qdxA02
GTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKLIY
YPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSFGLKISPRMGEPGDYLIERAFV
EK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Nov 2007 02:34

Assigning to "3.40.50.80" based on similarity with "1a8pA02"

Flow stage update by auto on 29 Nov 2007 02:20

No in_process hits for Domain "2qdxA02" ready to be processed

Flow stage update by auto on 29 Nov 2007 02:20

NW result present for Domain "2qdxA02"

Flow stage update by auto on 24 Nov 2007 14:38

All required files are present for Domain "2qdxA02"

Flow stage update by auto on 23 Nov 2007 14:01

Beginning processing for Domain "2qdxA02"

Insertion by auto on 23 Nov 2007 11:35

Final ChopClose added based on similarity with "1a8pA"