CATH Domain: 2qcfA00 XML data for domain: 2qcfA00

Molscript image for 2qcfA00
2qcfA00
PDB coordinates for domain 2qcfA00

PDB 2qcf, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.3
3.20.20.70.3.1
3.20.20.70.3.1.1
3.20.20.70.3.1.1.3
3.20.20.70.3.1.1.3.1

Segment boundaries for domain 2qcfA00

Chopping figure for domain 2qcfA00
DomainStart PDB ResidueStop PDB Residue
2qcfA00 223 479

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.20.20.70.3.1.1.3.1 (SIMAX score < 5)

Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1dvjA00 82.79 Pyrimidine metabolismMethanothermobacter thermautotrophicus str. Delta HOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23]Metabolic pathways 3.20.20.70 239 20 81 2.58 3.15
3f4wA00 80.12 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 12 73 2.62 3.58
3ldvA00 79.92 Pyrimidine metabolismMetabolic pathwaysVibrio choleraeOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23] 3.20.20.70 231 21 81 3.84 4.73
1q6oB00 79.76 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 13 74 2.87 3.84
1xi3A00 79.01 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 14 72 3.38 4.67
1m5wA00 76.89 Vitamin B6 metabolismMetabolic pathwaysPyridoxine 5-phosphate synthase [EC:2.6.99.2]Pyridoxine 5'-phosphate synthasePyridoxine biosynthetic process 3.20.20.70 242 7 72 3.12 4.28
1wa3D00 76.63 Thermotoga maritimaArginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolism 3.20.20.70 203 12 72 2.88 3.98
1qopA00 76.33 Phenylalanine, tyrosine and tryptophan biosynthesisSalmonella enterica subsp. enterica serovar TyphimuriumTryptophan synthase alpha chain [EC:4.2.1.20]Glycine, serine and threonine metabolismTryptophan synthase alpha chain 3.20.20.70 265 9 75 3.69 4.89
2fliC00 75.38 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 9 72 3.40 4.69
3ctlA00 74.71 [EC:5.1.3.-]D-allulose-6-phosphate 3-epimeraseAllulose 6-phosphate 3-epimerase activityProtein bindingEscherichia coli K-12 3.20.20.70 219 10 71 3.30 4.61
1wbhB00 74.35 Arginine and proline metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysPentose and glucuronate interconversionsPentose phosphate pathway 3.20.20.70 214 7 73 3.56 4.84
2yw3E00 74.23 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysThermus thermophilus HB8 3.20.20.70 198 12 71 3.40 4.77
1vcvA00 74.06 Pyrobaculum aerophilumProbable deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 226 6 67 2.97 4.39
1ub3A00 73.93 Thermus thermophilus HB8Deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 211 7 68 3.21 4.66
3cu2A00 73.76 Pentose and glucuronate interconversionsPentose phosphate pathwayHaemophilus somnus 129PTRibulose-5-phosphate 3-epimeraseRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 232 8 74 3.40 4.59
2nwrA00 73.71 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]2-dehydro-3-deoxyphosphooctonate aldolaseMetabolic pathwaysLipopolysaccharide biosynthesisAquifex aeolicus 3.20.20.70 257 7 78 3.85 4.92
Displaying entries 1 to 16 (page 1 of 1)


Domain ATOM Sequence

>pdb|2qcfA00
MELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLA
KHEFLIFENRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYT
RAAVRMAEEHSEFVVGFISGSRVSMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAA
EMYRKAAWEAYLSRLG    

Domain COMBS Sequence

>pdb|2qcfA00
GAMELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELIT
LAKXHEFLIFENRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATG
DYTRAAVRMAEEHSEFVVGFISGSRVSMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRL
EAAEMYRKAAWEAYLSRLGV    

Domain History Events (16)

Domain assigned by auto on 29 Nov 2007 03:09

Assigning to "3.20.20.70" based on similarity with "2qclA00"

Flow stage update by auto on 29 Nov 2007 03:09

No in_process hits for Domain "2qcfA00" ready to be processed

Update comment by auto on 29 Nov 2007 03:07

Domain "2qcfA00" hits Domain "2qcmA00" (100% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 03:04

Domain "2qcfA00" hits Domain "2qclB00" (100% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 03:01

Domain "2qcfA00" hits Domain "2qccA00" (99.6153846153846% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 02:58

Domain "2qcfA00" hits Domain "2qcdB00" (99.6153846153846% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 02:55

Domain "2qcfA00" hits Domain "2qclA00" (100% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 02:51

Domain "2qcfA00" hits Domain "2qcgA00" (99.6153846153846% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 02:47

Domain "2qcfA00" hits Domain "2qcgB00" (99.6153846153846% over 100%) which is currently in process

Update comment by auto on 29 Nov 2007 02:33

Domain "2qcfA00" hits Domain "2qccB00" (99.6153846153846% over 100%) which is currently in process

Update comment by auto on 28 Nov 2007 22:26

Domain "2qcfA00" hits Domain "2qchA00" (99.6153846153846% over 100%) which is currently in process

Flow stage update by auto on 28 Nov 2007 22:13

Domain "2qcfA00" hits Domain "2qchA00" (99.6153846153846% over 100%) which is currently in process

Flow stage update by auto on 28 Nov 2007 22:13

NW result present for Domain "2qcfA00"

Flow stage update by auto on 24 Nov 2007 14:38

All required files are present for Domain "2qcfA00"

Flow stage update by auto on 24 Nov 2007 02:37

Beginning processing for Domain "2qcfA00"

Insertion by auto on 23 Nov 2007 19:31

Final ChopClose added based on similarity with "2qclA"