CATH Domain: 2q9uB01 XML data for domain: 2q9uB01

Molscript image for 2q9uB01
2q9uB01
PDB coordinates for domain 2q9uB01

PDB 2q9u, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.60 4-Layer Sandwich
3.60.15 Metallo-beta-lactamase; Chain A
3.60.15.10 Metallo-beta-lactamase, chain A Gene3D
3.60.15.10.9
3.60.15.10.9.1
3.60.15.10.9.1.1
3.60.15.10.9.1.1.1
3.60.15.10.9.1.1.1.1

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Segment boundaries for domain 2q9uB01

Chopping figure for domain 2q9uB01
DomainStart PDB ResidueStop PDB Residue
2q9uB01 6 251
2q9uB02 258 402

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.60.15.10.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e5dA02 90.74 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.60.15.10 247 32 98 1.36 1.38
1smlA00 80.47 Stenotrophomonas maltophiliaMetallo-beta-lactamase L1 3.60.15.10 266 10 74 3.02 4.04
1jjeB00 80.44 Pseudomonas aeruginosaBeta-lactamase 3.60.15.10 221 13 83 3.60 4.32
1znbB00 80.08 Bacteroides fragilisBeta-lactamase type II 3.60.15.10 230 10 84 3.48 4.14
2p97A00 78.16 Anabaena variabilis ATCC 29413Putative uncharacterized protein 3.60.15.10 197 14 78 2.96 3.77
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2q9uB01
KYVQDQEMIPGVYWVGIVDWMVRIFHGYHTDEGSSYNSYFIDDECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNH
AEGDHASSLKDHYHKFTNATFVCTKKCQEHLKILYGMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDK
ILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTANILGLFSAQMRKALEVASTVEIKYILSAHGVSWRGDAMGLAIAE
YDRWSK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2q9uB01
MSSKPKYVQDQEMIPGVYWVGIVDWMVRIFHGYHTDEGSSYNSYFIDDECPTVIDSVKYPFAEEWLSRIAACCPLDKIKY
VVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKILYGMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTY
CPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTANILGLFSAQMRKALEVASTVEIKYILSAHGVSWRGDAMG
LAIAEYDRWSK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 18 Dec 2007 22:14

Assigning to "3.60.15.10" based on similarity with "1ycfA01"

Flow stage update by auto on 18 Dec 2007 22:03

No in_process hits for Domain "2q9uB01" ready to be processed

Flow stage update by auto on 18 Dec 2007 22:03

NW result present for Domain "2q9uB01"

Flow stage update by auto on 18 Dec 2007 06:06

All required files are present for Domain "2q9uB01"

Flow stage update by auto on 17 Dec 2007 10:25

Beginning processing for Domain "2q9uB01"

Insertion by auto on 17 Dec 2007 10:07

Final ChopClose added based on similarity with "2q9uA"