CATH Domain: 2q9oA01 XML data for domain: 2q9oA01

Molscript image for 2q9oA01
2q9oA01
PDB coordinates for domain 2q9oA01

PDB 2q9o, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.8
2.60.40.420.8.1
2.60.40.420.8.1.1
2.60.40.420.8.1.1.1
2.60.40.420.8.1.1.1.1

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Segment boundaries for domain 2q9oA01

Chopping figure for domain 2q9oA01
DomainStart PDB ResidueStop PDB Residue
2q9oA01 1 158
2q9oA02 159 342
2q9oA03 343 559

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.60.40.420.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1aozA01 87.64 L-ascorbate oxidaseCucurbita pepo var. melopepo 2.60.40.420 130 33 78 1.25 1.60
2qt6A01 87.44 LaccaseLentinus tigrinus 2.60.40.420 132 33 78 2.59 3.31
1sddB01 82.88 Coagulation factor VBos taurusCoagulation factor V (labile factor)Complement and coagulation cascades 2.60.40.420 156 19 70 1.94 2.74
1kbvA01 82.85 Neisseria gonorrhoeaeCopper-containing nitrite reductase 2.60.40.420 144 20 76 2.73 3.57
1kbvA02 80.77 Neisseria gonorrhoeaeCopper-containing nitrite reductase 2.60.40.420 154 14 76 3.31 4.33
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2q9oA01
EPTCNTPSNRACWSDGFDINTDYEVSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVT
VINNLVTNGTSIHWHGIQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2q9oA01
EPTCNTPSNRACWSDGFDINTDYEVSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVT
VINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGP
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Mar 2008 17:24

Assigning to "2.60.40.420" based on similarity with "1gw0A01"

Flow stage update by auto on 29 Mar 2008 17:08

No in_process hits for Domain "2q9oA01" ready to be processed

Flow stage update by auto on 29 Mar 2008 17:07

NW result present for Domain "2q9oA01"

Flow stage update by auto on 29 Mar 2008 11:05

All required files are present for Domain "2q9oA01"

Flow stage update by auto on 28 Mar 2008 11:14

Beginning processing for Domain "2q9oA01"

Insertion by auto on 28 Mar 2008 11:06

Final ChopClose added based on similarity with "1gw0A"