CATH Domain: 2q8gA01 XML data for domain: 2q8gA01

Molscript image for 2q8gA01
2q8gA01
PDB coordinates for domain 2q8gA01

PDB 2q8g, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.140 Butyryl-CoA Dehydrogenase, subunit A; domain 3
1.20.140.20 Gene3D
1.20.140.20.1
1.20.140.20.1.1
1.20.140.20.1.1.1
1.20.140.20.1.1.1.1
1.20.140.20.1.1.1.1.1

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Segment boundaries for domain 2q8gA01

Chopping figure for domain 2q8gA01
DomainStart PDB ResidueStop PDB Residue
2q8gA01 41 214
2q8gA02 215 399

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.20.140.20.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gkzA02 87.65 Mitochondrial alpha-ketoglutarate dehydrogenase complexATP bindingRattus norvegicus[3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase [EC:2.7.11.4][3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity 1.20.140.20 156 26 87 2.64 3.03
1yo7A00 78.91 Regulatory protein ropEscherichia coli 1.20.1440.10 120 4 69 3.41 4.89
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2q8gA01
GVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQE
LLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLF
GK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2q8gA01
SDSGSSPASERGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQL
VQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRI
SIRMLLNQHSLLFGGKGKGSPSHRK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Aug 2007 06:28

Assigning to "1.20.140.20" based on similarity with "1jm6B02"

Flow stage update by auto on 29 Aug 2007 06:13

No in_process hits for Domain "2q8gA01" ready to be processed

Flow stage update by auto on 29 Aug 2007 06:13

NW result present for Domain "2q8gA01"

Flow stage update by auto on 19 Aug 2007 10:13

All required files are present for Domain "2q8gA01"

Flow stage update by auto on 16 Aug 2007 22:23

Beginning processing for Domain "2q8gA01"

Insertion by auto on 16 Aug 2007 22:05

Final ChopClose added based on similarity with "2btzA"