Domain assigned by cuff on 18 Feb 2008 10:47
same superfamily
CATH Domain: 2q07A02
2q07A02
PDB 2q07, Chain A, Domain 2
| CATH Code | Level Description | Links |
|---|---|---|
 3
| Alpha Beta | |
 3.10
| Roll | |
 3.10.450
| Nuclear Transport Factor 2; Chain: A, | |
 3.10.450.90
| Gene3D | |
 3.10.450.90.2
| ||
 3.10.450.90.2.1
| ||
 3.10.450.90.2.1.1
| ||
 3.10.450.90.2.1.1.1
| ||
 3.10.450.90.2.1.1.1.1
|
Segment boundaries for domain 2q07A02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 2q07A01 | 244 | 394 |
| 2q07A02 | 395 | 459 |
| 2q07A03 | 460 | 527 |
Structural Neighbourhood (1 entries)
There are 1 matching structural neighberhood comparisons for CATH ID 3.10.450.90.2.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 1 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1q7hA01 | 79.66 | 3.10.450.120 | 63 | 15 | 84 | 3.44 | 4.09 |
[1]
Displaying entries 1 to 1 (page 1 of 1)
Domain History Events (72)
Domain assignment manual match h by cuff on 18 Feb 2008 10:46
same superfamily
Domain assignment manual match t by tronnberg on 20 Sep 2007 12:44
SSAP: 83.0 OV: 85 SEQ: 23. Similar linkage and structure (only differ with one small alfa helix). The query's function is unknown.
Homcheck review by tronnberg on 20 Sep 2007 12:44
SSAP: 83.0 OV: 85 SEQ: 23. Similar linkage and structure (only differ with one small alfa helix). The query's function is unknown.
Flow stage update by tronnberg on 20 Sep 2007 12:44
SSAP: 83.0 OV: 85 SEQ: 23. Similar linkage and structure (only differ with one small alfa helix). The query's function is unknown.
Homcheck allotment by tronnberg on 20 Sep 2007 12:42
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by tronnberg on 20 Sep 2007 12:42
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by auto on 17 Sep 2007 13:09
Domain "2q07A02" SCOP scan with no results - no SCOP mapping
Domain scan scop cath by auto on 17 Sep 2007 13:08
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2q07A02
Flow stage update by auto on 17 Sep 2007 12:06
Retrieved PRC_PFAMCATH results for job ID SID9782242730151616 and results inserted.
Domain scan prc pfamcath by auto on 17 Sep 2007 12:04
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 0 results for 2q07A02
Update comment by auto on 16 Sep 2007 06:29
PRC_PFAMCATH job SID9782242730151616 is not yet finished.
Prc pfamcath submit by auto on 16 Sep 2007 06:29
The entry "2q07A02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 16 Sep 2007 06:29
The entry "2q07A02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 16 Sep 2007 06:23
Retrieved SSAP results for job ID SID2348546109356352 and results inserted.
Domain scan ssap cath by auto on 16 Sep 2007 06:20
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 2093 results for 2q07A02
Update comment by auto on 15 Sep 2007 14:27
SSAP job SID2348546109356352 is not yet finished.
Ssap cath submit by auto on 15 Sep 2007 14:17
The entry "2q07A02" has been submitted to the SSAP webservice.
Flow stage update by auto on 15 Sep 2007 14:17
The entry "2q07A02" has been submitted to the SSAP webservice.
Flow stage update by auto on 15 Sep 2007 08:24
Giving up on SSAP job SID9408132304343580 because submission time of Sun Sep 9 22:49:10 2007 is more than 345600 seconds older than current time (Sat Sep 15 08:24:47 2007).
Update comment by auto on 09 Sep 2007 23:27
SSAP job SID9408132304343580 is not yet finished.
Ssap cath submit by auto on 09 Sep 2007 22:49
The entry "2q07A02" has been submitted to the SSAP webservice.
Flow stage update by auto on 09 Sep 2007 22:49
The entry "2q07A02" has been submitted to the SSAP webservice.
Flow stage update by auto on 09 Sep 2007 20:19
Giving up on SSAP job SID6469132968498840 because submission time of Wed Sep 5 18:59:10 2007 is more than 345600 seconds older than current time (Sun Sep 9 20:19:55 2007).
Update comment by auto on 05 Sep 2007 20:03
SSAP job SID6469132968498840 is not yet finished.
Ssap cath submit by auto on 05 Sep 2007 18:59
The entry "2q07A02" has been submitted to the SSAP webservice.
Flow stage update by auto on 05 Sep 2007 18:59
The entry "2q07A02" has been submitted to the SSAP webservice.
Flow stage update by auto on 05 Sep 2007 14:04
Retrieved PRC results for job ID SID7187062307638016 and inserted them into the database.
Domain scan prc cath by auto on 05 Sep 2007 14:03
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 1 results for 2q07A02
Flow stage update by auto on 05 Sep 2007 04:33
The entry "2q07A02" has been submitted to the PRC webservice.
Prc cath submit by auto on 05 Sep 2007 04:33
The entry "2q07A02" has been submitted to the PRC webservice.
Flow stage update by auto on 05 Sep 2007 01:49
Retrieved HMM(SAM) results for job ID SID1115580945493648 and inserted them into the database.
Domain scan sam cath by auto on 05 Sep 2007 01:49
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2q07A02
Update comment by auto on 04 Sep 2007 13:28
HMM(SAM) job SID1115580945493648 is not yet finished.
Sam cath submit by auto on 04 Sep 2007 10:34
The entry "2q07A02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 04 Sep 2007 10:34
The entry "2q07A02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 04 Sep 2007 07:34
Retrieved "2q07A02" CATHEDRAL results for job ID SID8267639399305664 and inserted them into the database.
Domain scan cathedral cath by auto on 04 Sep 2007 07:33
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 75 results for 2q07A02
Cathedral cath submit by auto on 03 Sep 2007 14:35
The entry "2q07A02" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 03 Sep 2007 14:35
The entry "2q07A02" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 03 Sep 2007 12:52
ScanList with 11099 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2q07A02.scanlist" for "2q07A02"
Write scan list by auto on 03 Sep 2007 12:52
Writing ScanList containing 11099 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2q07A02.scanlist" for domain "2q07A02"
Update comment by auto on 03 Sep 2007 10:11
Waiting for 18 new domains (example : 2qg4C01) to be processed so that they can be scanned against too.
Update comment by auto on 03 Sep 2007 06:32
Waiting for 73 new domains (example : 2q3eK03) to be processed so that they can be scanned against too.
Update comment by auto on 03 Sep 2007 02:37
Waiting for 140 new domains (example : 2q08A02) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 22:33
Waiting for 188 new domains (example : 2o3jA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 18:23
Waiting for 279 new domains (example : 2b43C04) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 14:23
Waiting for 351 new domains (example : 1sh0B02) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 10:16
Waiting for 431 new domains (example : 1r0kA03) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 02:29
Waiting for 551 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 22:13
Waiting for 607 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 18:16
Waiting for 686 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 14:17
Waiting for 771 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 11:42
Waiting for 841 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 06:17
Waiting for 903 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 03:34
Waiting for 969 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Aug 2007 20:08
Waiting for 1085 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 16:18
Waiting for 1046 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 10:13
Waiting for 1038 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 06:33
Waiting for 1087 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 02:38
Waiting for 1146 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 22:17
Waiting for 1197 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 14:43
Waiting for 1257 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 09:06
Waiting for 1140 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 02:24
Waiting for 1202 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Aug 2007 22:30
Waiting for 1261 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Flow stage update by auto on 28 Aug 2007 22:12
No satisfactory AssignClose result found.
Flow stage update by auto on 28 Aug 2007 22:05
No in_process hits for Domain "2q07A02" ready to be processed
Flow stage update by auto on 28 Aug 2007 22:05
NW result present for Domain "2q07A02"
Flow stage update by auto on 19 Aug 2007 10:12
All required files are present for Domain "2q07A02"
Flow stage update by auto on 18 Aug 2007 14:31
Beginning processing for Domain "2q07A02"
Insertion by cuff on 18 Aug 2007 14:00
nice chopping
