CATH Domain: 2pyxA01 XML data for domain: 2pyxA01

Molscript image for 2pyxA01
2pyxA01
PDB coordinates for domain 2pyxA01

PDB 2pyx, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.50 3-Layer(bba) Sandwich
3.50.50 FAD/NAD(P)-binding domain
3.50.50.60 Gene3D
3.50.50.60.3
3.50.50.60.3.1
3.50.50.60.3.1.1
3.50.50.60.3.1.1.1
3.50.50.60.3.1.1.1.1

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Segment boundaries for domain 2pyxA01

Chopping figure for domain 2pyxA01
DomainStart PDB ResidueStop PDB Residue
2pyxA01 0 84
2pyxA01 166 246
2pyxA01 335 380
2pyxA02 85 165
2pyxA02 247 334
2pyxA02 381 525

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.50.50.60.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1k0iA01 79.87 Pseudomonas aeruginosaP-hydroxybenzoate hydroxylaseP-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]2,4-Dichlorobenzoate degradationBenzoate degradation via hydroxylation 3.50.50.60 240 14 75 3.12 4.16
3cgvA01 79.32 3.50.50.60 219 17 77 3.38 4.38
1trbA01 79.28 Pyrimidine metabolismThioredoxin reductase (NADPH) [EC:1.8.1.9]Thioredoxin reductaseProtein bindingEscherichia coli K-12 3.50.50.60 187 18 79 3.80 4.79
1fl2A01 78.67 Alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]Alkyl hydroperoxide reductase subunit FProtein bindingEscherichia coli K-12Cytosol 3.50.50.60 186 15 81 4.03 4.95
3fbsB01 78.26 Agrobacterium tumefaciens str. C58Oxidoreductase 3.50.50.60 188 13 80 3.98 4.92
3c4aA01 78.07 Chromobacterium violaceumProbable tryptophan hydroxylase vioD 3.50.50.60 213 10 65 3.07 4.70
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2pyxA01
GQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSRSTLSKIGIDENDFIRQ
CDNYGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPF
LSQPGYRAKCWQNNCIAIGAAGFIEPLEASALALIEWTASTLAQQLPP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2pyxA01
GXXQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSXRSTLSKIGIDENDF
IRQCDNYGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQ
VPFLSQPGYRAKCWQNNCIAIGXAAGFIEPLEASALALIEWTASTLAQQLPP
BLAST against CATH

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Domain History Events (10)

Domain assigned by auto on 19 Mar 2008 17:16

Assigning to "3.50.50.60" based on similarity with "2pyxB01"

Flow stage update by auto on 19 Mar 2008 17:06

No in_process hits for Domain "2pyxA01" ready to be processed

Update comment by auto on 03 Sep 2007 20:10

Domain "2pyxA01" hits Domain "2pyxB01" (98.1132075471698% over 100%) which is currently in process

Update comment by auto on 03 Sep 2007 11:16

Domain "2pyxA01" hits Domain "2pyxB01" (98.1132075471698% over 100%) which is currently in process

Update comment by auto on 28 Aug 2007 22:06

Domain "2pyxA01" hits Domain "2pyxB01" (98.1132075471698% over 100%) which is currently in process

Flow stage update by auto on 28 Aug 2007 22:05

Domain "2pyxA01" hits Domain "2pyxB01" (98.1132075471698% over 100%) which is currently in process

Flow stage update by auto on 28 Aug 2007 22:05

NW result present for Domain "2pyxA01"

Flow stage update by auto on 22 Aug 2007 10:07

All required files are present for Domain "2pyxA01"

Flow stage update by auto on 21 Aug 2007 17:49

Beginning processing for Domain "2pyxA01"

Insertion by auto on 21 Aug 2007 17:09

Final ChopClose added based on similarity with "2pyxB"