CATH Domain: 2pu9C00 XML data for domain: 2pu9C00

Molscript image for 2pu9C00
2pu9C00
PDB coordinates for domain 2pu9C00

PDB 2pu9, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.30 Glutaredoxin
3.40.30.10 Glutaredoxin Gene3D
3.40.30.10.24
3.40.30.10.24.1
3.40.30.10.24.1.1
3.40.30.10.24.1.1.1
3.40.30.10.24.1.1.1.1

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Segment boundaries for domain 2pu9C00

Chopping figure for domain 2pu9C00
DomainStart PDB ResidueStop PDB Residue
2pu9C00 11 121

Structural Neighbourhood (31 entries)

There are 31 matching structural neighberhood comparisons for CATH ID 3.40.30.10.24.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 31 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gh2A00 92.39 CytoplasmHomo sapiensThioredoxin-like protein 1Disulfide oxidoreductase activity 3.40.30.10 107 24 95 1.14 1.19
2e0qA00 90.86 Sulfolobus tokodaii140aa long hypothetical thioredoxinThioredoxin 1 3.40.30.10 104 28 91 1.29 1.40
1thxA00 90.20 Nostoc sp. PCC 7120Thioredoxin-2 3.40.30.10 108 25 95 1.37 1.43
3gnjA00 88.97 Desulfitobacterium hafniense DCB-2Thioredoxin domain protein 3.40.30.10 107 20 93 3.60 3.84
1w4vA00 88.53 Thioredoxin, mitochondrialHomo sapiensThioredoxin 1 3.40.30.10 110 28 96 1.71 1.77
2b5eA01 87.94 Protein disulfide isomerase activityProtein disulfide oxidoreductase activityProtein bindingProtein foldingEndoplasmic reticulum lumen 3.40.30.10 119 25 89 3.15 3.50
1v98A00 87.81 Thermus thermophilus HB8Thioredoxin 2 [EC:1.8.1.8]Thioredoxin 3.40.30.10 92 27 79 1.55 1.96
2f51A00 87.50 Trichomonas vaginalisThioredoxin 1Thioredoxin 3.40.30.10 101 23 87 2.07 2.37
2dizA00 86.84 Anti-apoptosisHomo sapiensThioredoxin domain-containing protein 5 3.40.30.10 117 19 91 2.62 2.86
2trcP01 84.38 PhosducinRattus norvegicus 3.40.30.10 131 17 82 3.53 4.28
2av4A00 83.02 SpliceosomeU5 snRNP protein, DIM1 familyPlasmodium yoelii yoeliiDrosophila melanogaster RE13747p 3.40.30.10 135 7 79 3.65 4.61
1a8yA01 82.99 Calsequestrin-1Oryctolagus cuniculus 3.40.30.10 124 18 87 4.21 4.83
1mekA00 82.91 Cell surfaceER-Golgi intermediate compartmentProtein disulfide isomerase activityProtein bindingPeptidyl-proline hydroxylation to 4-hydroxy-L-proline 3.40.30.10 120 24 90 2.82 3.13
1bjxA00 82.89 Cell surfaceProtein disulfide isomerase activityER-Golgi intermediate compartmentProtein bindingPeptidyl-proline hydroxylation to 4-hydroxy-L-proline 3.40.30.10 110 13 86 2.67 3.09
1a8yA02 82.71 Calsequestrin-1Oryctolagus cuniculus 3.40.30.10 102 10 87 2.72 3.11
2b5eA04 82.62 Endoplasmic reticulum lumenProtein disulfide oxidoreductase activityProtein disulfide isomerase activityProlyl 4-hydroxylase, beta polypeptide [EC:5.3.4.1]Saccharomyces cerevisiae 3.40.30.10 140 27 76 2.84 3.72
2in3A01 82.38 Nitrosomonas europaeaPutative protein-disulfide isomerasePutative uncharacterized protein 3.40.30.10 78 14 66 1.93 2.90
3gixA00 82.29 Thioredoxin-like protein 4BHomo sapiens 3.40.30.10 133 9 76 2.05 2.67
2qsiA01 80.91 Putative hydrogenase expression/formation protein hupGHydrogenase-1 operon protein HyaERhodopseudomonas palustris 3.40.30.10 82 17 71 2.07 2.91
1sjiA03 79.47 Canis lupus familiarisCalsequestrin-2 3.40.30.10 123 6 84 2.98 3.52
1g7eA00 79.08 Rattus norvegicusEndoplasmic reticulum lumenEndoplasmic reticulum protein 29Transport vesicleEndoplasmic reticulum resident protein 29 3.40.30.10 122 14 86 3.86 4.44
1xg8A00 78.88 Staphylococcus aureus subsp. aureus N315Putative uncharacterized protein SA0798 3.40.30.30 108 9 80 3.78 4.71
1h75A00 78.81 Glutaredoxin-like protein NrdHGlutaredoxin-like protein nrdHEscherichia coli K-12 3.40.30.10 76 15 64 2.38 3.67
1ttzA00 78.37 Xanthomonas campestris pv. campestrisPutative uncharacterized protein 3.40.30.10 74 10 65 2.84 4.32
2p0gB00 77.02 Vibrio choleraeSelenoprotein W-related proteinSelenoprotein W-related protein 3.40.30.10 79 7 63 3.07 4.80
2fa8B00 76.52 Agrobacterium tumefaciens str. C58Selenoprotein W-related proteinPutative uncharacterized protein 3.40.30.10 86 5 63 3.05 4.84
3f9uA00 76.40 Bacteroides fragilis NCTC 9343Putative exported cytochrome C biogenesis-related protein 3.40.30.10 139 11 74 3.51 4.69
1nhyA01 75.85 Positive regulation of transcription from RNA polymerase II promoterCalcium ion bindingNucleusElongation factor 1-gamma 1Transcription coactivator activity 3.40.30.10 76 10 65 3.28 4.99
1nm3A02 74.77 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Haemophilus influenzaeHybrid peroxiredoxin hyPrx5 3.40.30.10 70 11 61 3.02 4.93
1t1vA00 74.63 Mus musculusSH3 domain-binding glutamic acid-rich-like protein 3 3.40.30.10 93 6 67 2.72 4.03
1u6tA00 72.06 CytoplasmSH3 domain-binding glutamic acid-rich-like proteinNucleusHomo sapiensSH3/SH2 adaptor activity 3.40.30.10 120 7 62 3.04 4.86
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Displaying entries 1 to 31 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2pu9C00
EAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVP
TFKILKENSVVGEVTGAKYDKLLEAIQAARS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2pu9C00
EAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVP
TFKILKENSVVGEVTGAKYDKLLEAIQAARS
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 13 Aug 2007 02:24

Assigning to "3.40.30.10" based on similarity with "1f9mA00"

Flow stage update by auto on 13 Aug 2007 02:18

No in_process hits for Domain "2pu9C00" ready to be processed

Flow stage update by auto on 13 Aug 2007 02:18

NW result present for Domain "2pu9C00"

Flow stage update by auto on 21 Jul 2007 23:04

All required files are present for Domain "2pu9C00"

Flow stage update by auto on 20 Jul 2007 15:36

Beginning processing for Domain "2pu9C00"

Insertion by auto on 20 Jul 2007 14:07

Final ChopClose added based on similarity with "2pvoC"