CATH Domain: 2psfA00 XML data for domain: 2psfA00

Molscript image for 2psfA00
2psfA00
PDB coordinates for domain 2psfA00

PDB 2psf, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1820 Gene3D
3.40.50.1820.8
3.40.50.1820.8.1
3.40.50.1820.8.1.1
3.40.50.1820.8.1.1.1
3.40.50.1820.8.1.1.1.1

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Segment boundaries for domain 2psfA00

Chopping figure for domain 2psfA00
DomainStart PDB ResidueStop PDB Residue
2psfA00 3 309

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 3.40.50.1820.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1j1iA00 82.20 Meta cleavage compound hydrolaseJanthinobacterium sp. J3 3.40.50.1820 258 16 80 2.98 3.69
1iupA00 81.61 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolasePseudomonas fluorescens 3.40.50.1820 271 15 85 3.52 4.11
1zoiA00 81.29 EsterasePseudomonas putida 3.40.50.1820 275 13 83 2.86 3.44
1ehyA00 81.25 3.40.50.1820 282 17 85 3.40 3.97
1brtA00 81.07 Streptomyces aureofaciensNon-haem bromoperoxidase BPO-A2 3.40.50.1820 277 15 82 2.63 3.20
3i28A03 81.03 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1820 312 16 85 2.91 3.41
1c4xA00 80.50 Biphenyl degradation2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase2,6-dioxo-6-phenylhexa-3-enoate hydrolase [EC:3.7.1.8]Metabolic pathwaysFluorene degradation 3.40.50.1820 281 16 84 3.60 4.25
1m33A00 79.34 Cofactor bindingBiotin biosynthesis protein BioHCarboxylesterase bioHCarboxylesterase activityEscherichia coli K-12 3.40.50.1820 251 18 79 2.98 3.75
3bwxA00 79.02 Alpha/beta hydrolaseNovosphingobium aromaticivorans DSM 12444 3.40.50.1820 275 14 80 4.00 4.97
3bdiA00 78.56 Putative uncharacterized protein Ta0194Thermoplasma acidophilum 3.40.50.1820 199 12 61 2.55 4.14
1r3dA00 77.57 Ubiquinone and other terpenoid-quinone biosynthesisMetabolic pathways2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]Vibrio choleraePutative uncharacterized protein 3.40.50.1820 253 11 77 3.54 4.57
2qmqA00 77.06 Mus musculusProtein NDRG2 3.40.50.1820 269 12 81 4.00 4.89
3e0xA00 77.05 Lipase-esterase related proteinClostridium acetobutylicum 3.40.50.1820 223 18 70 3.19 4.51
2i3dB00 75.43 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.1820 212 10 60 2.71 4.45
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2psfA00
SKVYDPEQRKRMITGPQWWARCKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMG
KSGKSGNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEED
IALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNA
YLRASDDLPKLFIESDPGFFSNAIVEGAKKFPNTEFVKVKGLHFLQEDAPDEMGKYIKSFVERVLKN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2psfA00
GSKVYDPEQRKRMITGPQWWARCKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGM
GKSGKSGNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEE
DIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYN
AYLRASDDLPKLFIESDPGFFSNAIVEGAKKFPNTEFVKVKGLHFLQEDAPDEMGKYIKSFVERVLKNEQ
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 04 Aug 2007 22:36

Assigning to "3.40.50.1820" based on similarity with "1cv2A00"

Flow stage update by auto on 04 Aug 2007 22:33

No in_process hits for Domain "2psfA00" ready to be processed

Flow stage update by auto on 04 Aug 2007 22:33

NW result present for Domain "2psfA00"

Flow stage update by auto on 16 Jul 2007 22:39

All required files are present for Domain "2psfA00"

Flow stage update by auto on 14 Jul 2007 23:03

Beginning processing for Domain "2psfA00"

Insertion by auto on 14 Jul 2007 22:33

Final ChopClose added based on similarity with "2psdA"