CATH Domain: 2pr9A02 XML data for domain: 2pr9A02

Molscript image for 2pr9A02
2pr9A02
PDB coordinates for domain 2pr9A02

PDB 2pr9, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1170 Gene3D
2.60.40.1170.2
2.60.40.1170.2.1
2.60.40.1170.2.1.1
2.60.40.1170.2.1.1.1
2.60.40.1170.2.1.1.1.1

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Segment boundaries for domain 2pr9A02

Chopping figure for domain 2pr9A02
DomainStart PDB ResidueStop PDB Residue
2pr9A01 159 284
2pr9A01 392 430
2pr9A02 285 391
2pr9A02 431 435

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.60.40.1170.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jv2A03 78.28 Negative regulation of macrophage derived foam cell differentiationProtein bindingNegative regulation of low-density lipoprotein receptor biosynthetic processIntegrin alpha-VNegative regulation of lipid storage 2.60.40.1510 140 9 77 2.84 3.65
1ifrA00 76.99 Perinuclear region of cytoplasmMuscle organ developmentLamin-A/CStructural molecule activityHomo sapiens 2.60.40.1260 113 3 69 3.43 4.91
1n67A01 75.39 Staphylococcus aureus subsp. aureus str. NewmanClumping factor A 2.60.40.1280 141 8 72 3.18 4.40
1r17A02 75.23 Serine-aspartate repeat-containing protein GStaphylococcus epidermidis 2.60.40.1290 158 10 67 3.26 4.86
1n67A02 73.46 Staphylococcus aureus subsp. aureus str. NewmanClumping factor A 2.60.40.1290 191 4 54 2.69 4.94
1jv2A04 73.39 Negative regulation of macrophage derived foam cell differentiationProtein bindingNegative regulation of low-density lipoprotein receptor biosynthetic processIntegrin alpha-VNegative regulation of lipid storage 2.60.40.1530 188 9 58 2.81 4.80
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2pr9A02
LPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKES
QISAEIELLPTNDKKKWARPPISMNFEYETRC
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2pr9A02
LPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKES
QISAEIELLPTNDKKKWARPPISMNFEYETRC
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 22 Mar 2008 17:24

Assigning to "2.60.40.1170" based on similarity with "1bw8A01"

Flow stage update by auto on 22 Mar 2008 17:08

No in_process hits for Domain "2pr9A02" ready to be processed

Flow stage update by auto on 22 Mar 2008 17:08

NW result present for Domain "2pr9A02"

Flow stage update by auto on 22 Mar 2008 11:05

All required files are present for Domain "2pr9A02"

Flow stage update by auto on 21 Mar 2008 11:12

Beginning processing for Domain "2pr9A02"

Insertion by auto on 21 Mar 2008 11:07

Final ChopClose added based on similarity with "1bw8A"