CATH Domain: 2piaA03 XML data for domain: 2piaA03

Molscript image for 2piaA03
2piaA03
PDB coordinates for domain 2piaA03

PDB 2pia, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.20 Ubiquitin-like (UB roll)
3.10.20.30 Gene3D
3.10.20.30.10
3.10.20.30.10.1
3.10.20.30.10.1.1
3.10.20.30.10.1.1.1
3.10.20.30.10.1.1.1.1

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Segment boundaries for domain 2piaA03

Chopping figure for domain 2piaA03
DomainStart PDB ResidueStop PDB Residue
2piaA01 1 104
2piaA02 105 225
2piaA03 226 321

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.10.20.30.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1l5pA00 82.57 FerredoxinTrichomonas vaginalis 3.10.20.30 93 13 87 3.26 3.73
1i7hC00 82.48 2Fe-2S ferredoxinFerredoxin, 2Fe-2SProtein bindingEscherichia coli K-12 3.10.20.30 108 15 77 3.13 4.02
1doiA00 81.31 Ferredoxin-1Haloarcula marismortui 3.10.20.30 128 20 65 2.07 3.15
2h88B01 76.78 Citrate cycle (TCA cycle)Oxidative phosphorylationSuccinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1]Gallus gallusMetabolic pathways 3.10.20.30 107 10 67 3.32 4.93
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2piaA03
GATNTNARENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSGEADHRDMVLRDDEKGTQI
MVCVSRAKSAELVLDL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2piaA03
GATNTNARENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSGEADHRDMVLRDDEKGTQI
MVCVSRAKSAELVLDL
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "2pia003" to "2piaA03" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:50

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:50

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:55

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"