CATH Domain: 2pg0A03 XML data for domain: 2pg0A03

Molscript image for 2pg0A03
2pg0A03
PDB coordinates for domain 2pg0A03

PDB 2pg0, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.140 Butyryl-CoA Dehydrogenase, subunit A; domain 3
1.20.140.10 Butyryl-CoA Dehydrogenase, subunit A, domain 3 Gene3D
1.20.140.10.2
1.20.140.10.2.1
1.20.140.10.2.1.1
1.20.140.10.2.1.1.1
1.20.140.10.2.1.1.1.1

[top]
Segment boundaries for domain 2pg0A03

Chopping figure for domain 2pg0A03
DomainStart PDB ResidueStop PDB Residue
2pg0A01 8 124
2pg0A02 125 233
2pg0A03 236 384

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 1.20.140.10.2.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rx0A03 93.67 Lipid metabolic processIsobutyryl-CoA dehydrogenase [EC:1.3.99.-]Valine, leucine and isoleucine degradationHomo sapiensIsobutyryl-CoA dehydrogenase, mitochondrial 1.20.140.10 155 32 96 1.10 1.14
1siqA03 92.48 Fatty acid metabolismGlutaryl-CoA dehydrogenase [EC:1.3.99.7]Glutaryl-CoA dehydrogenase activityHomo sapiensGlutaryl-CoA dehydrogenase, mitochondrial 1.20.140.10 155 25 95 1.13 1.18
1ivhA03 91.76 Isovaleryl-CoA dehydrogenase, mitochondrialHomo sapiens 1.20.140.10 141 29 93 0.96 1.02
1r2jA03 91.63 Streptomyces hygroscopicus subsp. ascomyceticusFkbI 1.20.140.10 144 20 94 1.41 1.49
2ddhA03 88.78 Fatty acid metabolismPeroxisomeRattus norvegicusPPAR signaling pathwayPalmitoyl-CoA oxidase activity 1.20.140.10 157 17 87 1.73 1.97
2uxwA01 88.27 Fatty acid metabolismEnergy derivation by oxidation of organic compoundsMitochondrial nucleoidMetabolic pathwaysVery long-chain specific acyl-CoA dehydrogenase, mitochondrial 1.20.140.10 186 26 80 1.18 1.47
2rfqC03 84.23 Rhodococcus jostii RHA13-HSA hydroxylase, oxygenase 1.20.140.10 169 11 80 2.67 3.32
2or0A03 81.83 Rhodococcus jostii RHA1Hydroxylase 1.20.140.10 179 16 79 2.35 2.96
1w07A04 80.81 Fatty acid metabolismBiosynthesis of plant hormonesLong-chain fatty acid metabolic processMetabolic pathwaysArabidopsis thaliana 1.20.140.10 129 5 77 3.20 4.11
1u8vB03 80.33 Gamma-aminobutyrate metabolism dehydratase/isomeraseClostridium aminobutyricum 1.20.140.10 213 13 67 2.30 3.40
[1]
Displaying entries 1 to 10 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2pg0A03
KGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAG
KQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQLD
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2pg0A03
KGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAG
KQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQLD
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 04 Aug 2007 18:46

Assigning to "1.20.140.10" based on similarity with "1ws9A03"

Flow stage update by auto on 04 Aug 2007 18:42

No in_process hits for Domain "2pg0A03" ready to be processed

Flow stage update by auto on 04 Aug 2007 18:42

NW result present for Domain "2pg0A03"

Flow stage update by auto on 14 Jul 2007 06:02

All required files are present for Domain "2pg0A03"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2pg0A03"

Insertion by auto on 13 Jul 2007 15:41

Final ChopClose added based on similarity with "1ws9A"