Domain assigned by cuff on 02 Apr 2008 11:14
same superfamily
| CATH Code | Level Description | Links |
|---|---|---|
3
| Alpha Beta | |
3.40
| 3-Layer(aba) Sandwich | |
3.40.630
| Aminopeptidase | |
3.40.630.30
| Gene3D | |
3.40.630.30.3
| ||
3.40.630.30.3.1
| ||
3.40.630.30.3.1.1
| ||
3.40.630.30.3.1.1.1
| ||
3.40.630.30.3.1.1.1.1
|
There are 31 matching structural neighberhood comparisons for CATH ID 3.40.630.30.3.1.1.1.1 (SIMAX score < 5)
>pdb|2pc1A00 NLYFQGQIRLAFPNEIDQILLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGLATYAAVIDGHEEVY DAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKGPDFRCDTHEKNVTQHILNKLGYQYCGKVPLDGVR LAYQKIKEK
same superfamily
SSAP: 81.3 OV: 83 SEQ: 13. Similar linkage and structure (only differ with one alfa helix). Share the same function as acetyltransferase.
SSAP: 81.3 OV: 83 SEQ: 13. Similar linkage and structure (only differ with one alfa helix). Share the same function as acetyltransferase.
SSAP: 81.3 OV: 83 SEQ: 13. Similar linkage and structure (only differ with one alfa helix). Share the same function as acetyltransferase.
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Domain "2pc1A00" SCOP scan with no results - no SCOP mapping
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2pc1A00
Retrieved PRC_PFAMCATH results for job ID SID4527585996531648 and results inserted.
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 208 results for 2pc1A00
PRC_PFAMCATH job SID4527585996531648 is not yet finished.
The entry "2pc1A00" has been submitted to the PRC_PFAMCATH webservice.
The entry "2pc1A00" has been submitted to the PRC_PFAMCATH webservice.
Retrieved SSAP results for job ID SID2479474847264896 and results inserted.
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 414 results for 2pc1A00
SSAP job SID2479474847264896 is not yet finished.
The entry "2pc1A00" has been submitted to the SSAP webservice.
The entry "2pc1A00" has been submitted to the SSAP webservice.
Giving up on SSAP job SID8856498620965408 because submission time of Wed Sep 5 16:33:42 2007 is more than 345600 seconds older than current time (Sun Sep 9 20:07:58 2007).
SSAP job SID8856498620965408 is not yet finished.
The entry "2pc1A00" has been submitted to the SSAP webservice.
The entry "2pc1A00" has been submitted to the SSAP webservice.
Retrieved PRC results for job ID SID5239809559926630 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 64 results for 2pc1A00
The entry "2pc1A00" has been submitted to the PRC webservice.
The entry "2pc1A00" has been submitted to the PRC webservice.
Retrieved HMM(SAM) results for job ID SID5571354704147968 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 14 results for 2pc1A00
HMM(SAM) job SID5571354704147968 is not yet finished.
The entry "2pc1A00" has been submitted to the HMM (SAM) webservice.
The entry "2pc1A00" has been submitted to the HMM (SAM) webservice.
Retrieved "2pc1A00" CATHEDRAL results for job ID SID8158995625933680 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 31 results for 2pc1A00
The entry "2pc1A00" has been submitted to the CATHEDRAL webservice.
The entry "2pc1A00" has been submitted to the CATHEDRAL webservice.
ScanList with 11099 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2pc1A00.scanlist" for "2pc1A00"
Writing ScanList containing 11099 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2pc1A00.scanlist" for domain "2pc1A00"
Waiting for 18 new domains (example : 2qg4C01) to be processed so that they can be scanned against too.
Waiting for 73 new domains (example : 2q3eK03) to be processed so that they can be scanned against too.
Waiting for 140 new domains (example : 2q08A02) to be processed so that they can be scanned against too.
Waiting for 188 new domains (example : 2o3jA01) to be processed so that they can be scanned against too.
Waiting for 279 new domains (example : 2b43C04) to be processed so that they can be scanned against too.
Waiting for 351 new domains (example : 1sh0B02) to be processed so that they can be scanned against too.
Waiting for 431 new domains (example : 1r0kA03) to be processed so that they can be scanned against too.
Waiting for 551 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 607 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 686 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 771 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 841 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 903 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 969 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 1085 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
No satisfactory AssignClose result found.
No in_process hits for Domain "2pc1A00" ready to be processed
NW result present for Domain "2pc1A00"
All required files are present for Domain "2pc1A00"
Beginning processing for Domain "2pc1A00"
nice chopping