Domain assigned by cuff on 02 Apr 2008 15:26
same superfamily
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 2p8tA01 | 14 | 82 |
| 2p8tA01 | 192 | 199 |
| 2p8tA02 | 83 | 191 |
There are 86 matching structural neighberhood comparisons for CATH ID 1.10.10.10.28.1.1.1.1 (SIMAX score < 5)
>pdb|2p8tA01 EYTVEDVLAVIFLLKEPLGRKQISERLELGEGSVRTLLRKLSHLDIIRSKGHFLTLKGKEIRDKLLSTPEILEVV
same superfamily
ample evidence for homology
SSAP: 87.7 OV: 84 SEQ: 23. Very similar linkage and structure. the query's function is unknown.
SSAP: 87.7 OV: 84 SEQ: 23. Very similar linkage and structure. the query's function is unknown.
SSAP: 87.7 OV: 84 SEQ: 23. Very similar linkage and structure. the query's function is unknown.
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Domain "2p8tA01" SCOP scan with no results - no SCOP mapping
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2p8tA01
Retrieved PRC_PFAMCATH results for job ID SID1641614332860128 and results inserted.
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 471 results for 2p8tA01
PRC_PFAMCATH job SID1641614332860128 is not yet finished.
The entry "2p8tA01" has been submitted to the PRC_PFAMCATH webservice.
The entry "2p8tA01" has been submitted to the PRC_PFAMCATH webservice.
Retrieved SSAP results for job ID SID0207931552334376 and results inserted.
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 2792 results for 2p8tA01
SSAP job SID0207931552334376 is not yet finished.
The entry "2p8tA01" has been submitted to the SSAP webservice.
The entry "2p8tA01" has been submitted to the SSAP webservice.
Giving up on SSAP job SID5957303542815200 because submission time of Wed Sep 5 16:31:07 2007 is more than 345600 seconds older than current time (Sun Sep 9 20:06:06 2007).
SSAP job SID5957303542815200 is not yet finished.
The entry "2p8tA01" has been submitted to the SSAP webservice.
The entry "2p8tA01" has been submitted to the SSAP webservice.
Retrieved PRC results for job ID SID0200285832547878 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 26 results for 2p8tA01
The entry "2p8tA01" has been submitted to the PRC webservice.
The entry "2p8tA01" has been submitted to the PRC webservice.
Retrieved HMM(SAM) results for job ID SID6478635490469408 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 2 results for 2p8tA01
HMM(SAM) job SID6478635490469408 is not yet finished.
The entry "2p8tA01" has been submitted to the HMM (SAM) webservice.
The entry "2p8tA01" has been submitted to the HMM (SAM) webservice.
Retrieved "2p8tA01" CATHEDRAL results for job ID SID3989432996495072 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 68 results for 2p8tA01
The entry "2p8tA01" has been submitted to the CATHEDRAL webservice.
The entry "2p8tA01" has been submitted to the CATHEDRAL webservice.
ScanList with 11099 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2p8tA01.scanlist" for "2p8tA01"
Writing ScanList containing 11099 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2p8tA01.scanlist" for domain "2p8tA01"
Waiting for 18 new domains (example : 2qg4C01) to be processed so that they can be scanned against too.
Waiting for 73 new domains (example : 2q3eK03) to be processed so that they can be scanned against too.
Waiting for 140 new domains (example : 2q08A02) to be processed so that they can be scanned against too.
Waiting for 188 new domains (example : 2o3jA01) to be processed so that they can be scanned against too.
Waiting for 279 new domains (example : 2b43C04) to be processed so that they can be scanned against too.
Waiting for 351 new domains (example : 1sh0B02) to be processed so that they can be scanned against too.
Waiting for 431 new domains (example : 1r0kA03) to be processed so that they can be scanned against too.
Waiting for 551 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 607 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 686 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 771 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 841 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 903 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 969 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 1085 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
No satisfactory AssignClose result found.
No in_process hits for Domain "2p8tA01" ready to be processed
NW result present for Domain "2p8tA01"
All required files are present for Domain "2p8tA01"
Beginning processing for Domain "2p8tA01"
nice chopping