Domain assigned by cuff on 07 May 2008 13:16
same superfamily
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 2p7jB01 | 8 | 46 |
| 2p7jB02 | 47 | 180 |
| 2p7jB03 | 181 | 275 |
There are 98 matching structural neighberhood comparisons for CATH ID 1.20.5.170.17.1.1.1.1 (SIMAX score < 5)
same superfamily
single helices with same function
SSAP: 92.0 OV: 92 SEQ: 7. Functionally different. None of the matches on the scan list with a CATH code has the same function as the query.
SSAP: 92.0 OV: 92 SEQ: 7. Functionally different. None of the matches on the scan list with a CATH code has the same function as the query.
SSAP: 92.0 OV: 92 SEQ: 7. Functionally different. None of the matches on the scan list with a CATH code has the same function as the query.
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Domain "2p7jB01" SCOP scan with no results - no SCOP mapping
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2p7jB01
Retrieved PRC_PFAMCATH results for job ID SID7809094607032960 and results inserted.
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 0 results for 2p7jB01
PRC_PFAMCATH job SID7809094607032960 is not yet finished.
The entry "2p7jB01" has been submitted to the PRC_PFAMCATH webservice.
The entry "2p7jB01" has been submitted to the PRC_PFAMCATH webservice.
Retrieved SSAP results for job ID SID2646070425579408 and results inserted.
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 1135 results for 2p7jB01
SSAP job SID2646070425579408 is not yet finished.
The entry "2p7jB01" has been submitted to the SSAP webservice.
The entry "2p7jB01" has been submitted to the SSAP webservice.
Giving up on SSAP job SID8905477149804064 because submission time of Wed Sep 5 16:30:03 2007 is more than 345600 seconds older than current time (Sun Sep 9 20:05:23 2007).
SSAP job SID8905477149804064 is not yet finished.
The entry "2p7jB01" has been submitted to the SSAP webservice.
The entry "2p7jB01" has been submitted to the SSAP webservice.
Retrieved PRC results for job ID SID1167511078918504 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 1 results for 2p7jB01
The entry "2p7jB01" has been submitted to the PRC webservice.
The entry "2p7jB01" has been submitted to the PRC webservice.
Retrieved HMM(SAM) results for job ID SID3474665728389712 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2p7jB01
HMM(SAM) job SID3474665728389712 is not yet finished.
The entry "2p7jB01" has been submitted to the HMM (SAM) webservice.
The entry "2p7jB01" has been submitted to the HMM (SAM) webservice.
Retrieved "2p7jB01" CATHEDRAL results for job ID SID9675054393433120 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 0 results for 2p7jB01
The entry "2p7jB01" has been submitted to the CATHEDRAL webservice.
The entry "2p7jB01" has been submitted to the CATHEDRAL webservice.
ScanList with 11099 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2p7jB01.scanlist" for "2p7jB01"
Writing ScanList containing 11099 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2p7jB01.scanlist" for domain "2p7jB01"
Waiting for 18 new domains (example : 2qg4C01) to be processed so that they can be scanned against too.
Waiting for 73 new domains (example : 2q3eK03) to be processed so that they can be scanned against too.
Waiting for 140 new domains (example : 2q08A02) to be processed so that they can be scanned against too.
Waiting for 188 new domains (example : 2o3jA01) to be processed so that they can be scanned against too.
Waiting for 279 new domains (example : 2b43C04) to be processed so that they can be scanned against too.
Waiting for 351 new domains (example : 1sh0B02) to be processed so that they can be scanned against too.
Waiting for 431 new domains (example : 1r0kA03) to be processed so that they can be scanned against too.
Waiting for 551 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 607 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 686 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 771 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Waiting for 841 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
No satisfactory AssignClose result found.
No in_process hits for Domain "2p7jB01" ready to be processed
NW result present for Domain "2p7jB01"
All required files are present for Domain "2p7jB01"
Beginning processing for Domain "2p7jB01"
nice chopping