CATH Domain: 2p3yA01 XML data for domain: 2p3yA01

Molscript image for 2p3yA01
2p3yA01
PDB coordinates for domain 2p3yA01

PDB 2p3y, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.20 Single Sheet
2.20.25 N-terminal domain of TfIIb
2.20.25.10 Gene3D
2.20.25.10.7
2.20.25.10.7.1
2.20.25.10.7.1.1
2.20.25.10.7.1.1.1
2.20.25.10.7.1.1.1.1

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Segment boundaries for domain 2p3yA01

Chopping figure for domain 2p3yA01
DomainStart PDB ResidueStop PDB Residue
2p3yA01 22 51
2p3yA02 53 82
2p3yA02 231 307
2p3yA03 83 230
2p3yA04 308 482

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.20.25.10.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lqlA01 82.78 Mycoplasma pneumoniaeUncharacterized protein MG427 homolog 2.20.25.10 26 11 82 2.79 3.40
1tf6A04 74.61 Xenopus laevisTranscription factor IIIA 3.30.160.60 30 7 93 3.72 3.99
1meyC03 74.03 3.30.160.60 29 7 86 3.73 4.33
1tfiA00 70.18 Transcription from RNA polymerase II promoterTranscription elongation factor S-IITranscription elongation factor A protein 1General RNA polymerase II transcription factor activityHomo sapiens 2.20.25.10 50 10 42 2.06 4.90
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2p3yA01
QETVVPSRVGDLKFESDFPTQETKNLNE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2p3yA01
QETVVPSRVGDLKFESDFPTQETXKNXLNE
BLAST against CATH

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Domain History Events (10)

Domain assigned by auto on 19 May 2008 14:44

Assigning to "2.20.25.10" based on similarity with "2p3yB01"

Flow stage update by auto on 19 May 2008 14:42

No in_process hits for Domain "2p3yA01" ready to be processed

Update comment by auto on 03 Sep 2007 20:10

Domain "2p3yA01" hits Domain "2p3yB01" (93.3333333333333% over 100%) which is currently in process

Update comment by auto on 03 Sep 2007 11:16

Domain "2p3yA01" hits Domain "2p3yB01" (93.3333333333333% over 100%) which is currently in process

Update comment by auto on 28 Aug 2007 06:13

Domain "2p3yA01" hits Domain "2p3yB01" (93.3333333333333% over 100%) which is currently in process

Flow stage update by auto on 28 Aug 2007 06:12

Domain "2p3yA01" hits Domain "2p3yB01" (93.3333333333333% over 100%) which is currently in process

Flow stage update by auto on 28 Aug 2007 06:12

NW result present for Domain "2p3yA01"

Flow stage update by auto on 21 Aug 2007 10:06

All required files are present for Domain "2p3yA01"

Flow stage update by auto on 20 Aug 2007 17:33

Beginning processing for Domain "2p3yA01"

Insertion by cuff on 20 Aug 2007 13:55

nice chopping