CATH Domain: 2ozlB02 XML data for domain: 2ozlB02

Molscript image for 2ozlB02
2ozlB02
PDB coordinates for domain 2ozlB02

PDB 2ozl, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.920 Gene3D
3.40.50.920.4
3.40.50.920.4.1
3.40.50.920.4.1.1
3.40.50.920.4.1.1.1
3.40.50.920.4.1.1.1.1

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Segment boundaries for domain 2ozlB02

Chopping figure for domain 2ozlB02
DomainStart PDB ResidueStop PDB Residue
2ozlB01 2 194
2ozlB02 195 328

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.40.50.920.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2pjuC01 79.81 Positive regulation of gene-specific transcriptionPropionate catabolism operon regulatory proteinNegative regulation of gene-specific transcriptionEscherichia coli K-12Specific transcriptional repressor activity 3.40.50.2300 100 12 67 2.76 4.06
1l8aA03 79.06 Citrate cycle (TCA cycle)Pyruvate metabolismValine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolism 3.40.50.920 181 11 67 2.59 3.84
2c42A02 78.73 Pyruvate-ferredoxin oxidoreductaseDesulfovibrio africanus 3.40.50.920 157 9 76 3.08 4.03
2q5cA01 76.90 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.2300 97 9 67 3.21 4.78
1q57G02 76.44 Enterobacteria phage T7DNA primase/helicase 3.40.1360.10 126 4 79 3.53 4.42
1qgoA02 75.54 Porphyrin and chlorophyll metabolismMetabolic pathwaysSirohydrochlorin cobaltochelataseSalmonella enterica subsp. enterica serovar TyphimuriumSirohydrochlorin cobaltochelatase [EC:4.99.1.3] 3.40.50.1400 134 6 79 3.83 4.80
8abpA01 74.03 ABC transportersL-arabinose-binding periplasmic proteinL-arabinose transport system substrate-binding proteinEscherichia coli K-12 3.40.50.2300 138 6 71 2.95 4.11
1bykA01 73.86 Specific transcriptional repressor activityLacI family transcriptional regulator, trehalose operon repressorSequence-specific DNA binding transcription factor activityTranscriptionHTH-type transcriptional regulator treR 3.40.50.2300 138 5 76 3.77 4.95
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ozlB02
IGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAE
ICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ozlB02
IGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAE
ICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLN
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 04 Aug 2007 02:48

Assigning to "3.40.50.920" based on similarity with "1ni4B02"

Flow stage update by auto on 04 Aug 2007 02:46

No in_process hits for Domain "2ozlB02" ready to be processed

Flow stage update by auto on 04 Aug 2007 02:46

NW result present for Domain "2ozlB02"

Flow stage update by auto on 14 Jul 2007 06:02

All required files are present for Domain "2ozlB02"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2ozlB02"

Insertion by auto on 13 Jul 2007 15:11

Final ChopClose added based on similarity with "1ni4B"