CATH Domain: 2oklB00 XML data for domain: 2oklB00

Molscript image for 2oklB00
2oklB00
PDB coordinates for domain 2oklB00

PDB 2okl, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.45 Peptide Deformylase
3.90.45.10 Peptide Deformylase Gene3D
3.90.45.10.2
3.90.45.10.2.3
3.90.45.10.2.3.1
3.90.45.10.2.3.1.1
3.90.45.10.2.3.1.1.1

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Segment boundaries for domain 2oklB00

Chopping figure for domain 2oklB00
DomainStart PDB ResidueStop PDB Residue
2oklB00 1 184

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.90.45.10.2.3.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lmeA00 88.48 Thermotoga maritimaPeptide deformylase[EC:3.5.1.88] 3.90.45.10 153 31 81 1.66 2.05
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2oklB00
MLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDA
DGTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNG
VMFYDHINKENPFAAPDDSKPLER
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2oklB00
HMLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTD
ADGTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLN
GVMFYDHINKENPFAAPDDSKPLER
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 19 Jan 2008 17:35

Assigning to "3.90.45.10" based on similarity with "2oklA00"

Flow stage update by auto on 19 Jan 2008 17:34

No in_process hits for Domain "2oklB00" ready to be processed

Update comment by auto on 19 Jan 2008 17:23

Domain "2oklB00" hits Domain "2oklA00" (100% over 100%) which is currently in process

Flow stage update by auto on 19 Jan 2008 17:07

Domain "2oklB00" hits Domain "2oklA00" (100% over 100%) which is currently in process

Flow stage update by auto on 19 Jan 2008 17:07

NW result present for Domain "2oklB00"

Flow stage update by auto on 19 Jan 2008 11:04

All required files are present for Domain "2oklB00"

Flow stage update by auto on 18 Jan 2008 11:54

Beginning processing for Domain "2oklB00"

Insertion by auto on 18 Jan 2008 11:09

Final ChopClose added based on similarity with "2oklA"