CATH Domain: 2ohhA02 XML data for domain: 2ohhA02

Molscript image for 2ohhA02
2ohhA02
PDB coordinates for domain 2ohhA02

PDB 2ohh, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.360 Gene3D
3.40.50.360.15
3.40.50.360.15.1
3.40.50.360.15.1.1
3.40.50.360.15.1.1.1
3.40.50.360.15.1.1.1.1

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Segment boundaries for domain 2ohhA02

Chopping figure for domain 2ohhA02
DomainStart PDB ResidueStop PDB Residue
2ohhA01 1 252
2ohhA02 258 401

Structural Neighbourhood (70 entries)

There are 70 matching structural neighberhood comparisons for CATH ID 3.40.50.360.15.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 70 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e5dA01 93.26 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.40.50.360 143 30 97 1.17 1.19
5nulA00 89.57 Clostridium beijerinckiiFlavodoxin 3.40.50.360 138 22 93 1.74 1.87
3d7nA00 87.48 Agrobacterium tumefaciens str. C58Flavodoxin, WrbA-like protein 3.40.50.360 153 15 88 2.24 2.52
1vmeA02 86.81 Thermotoga maritimaPutative uncharacterized protein 3.40.50.360 144 27 93 2.60 2.79
2arkA00 84.38 FlavodoxinAquifex aeolicus 3.40.50.360 180 29 73 1.83 2.48
1bvyF00 82.47 Bacillus megateriumBifunctional P-450/NADPH-P450 reductase 3.40.50.360 152 17 89 3.13 3.50
3cwcB01 81.79 Glycerate kinase [EC:2.7.1.31]Glycerolipid metabolismSalmonella enterica subsp. enterica serovar TyphimuriumPutative glycerate kinase 2Glycine, serine and threonine metabolism 3.40.50.10350 137 11 80 3.48 4.32
1k68A00 80.16 Tolypothrix sp. PCC 7601Response regulator 3.40.50.2300 139 7 82 3.80 4.60
1ny5A01 79.97 Transcriptional regulator (NtrC family)Two-component system, NtrC family, response regulatorAquifex aeolicus 3.40.50.2300 136 12 79 3.36 4.21
1w25B02 79.36 Two-component systemCell cycle - CaulobacterCaulobacter vibrioidesIdentical protein bindingTwo-component system, cell cycle response regulator 3.40.50.2300 143 10 76 3.04 3.98
1a2oA01 79.31 Bacterial chemotaxisTwo-component systemChemotaxis response regulator protein-glutamate methylesteraseTwo-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]Salmonella enterica subsp. enterica serovar Typhimurium 3.40.50.2300 133 15 82 3.24 3.92
2b4aA00 79.30 BH3024 proteinBacillus halodurans 3.40.50.2300 116 12 77 3.31 4.29
2jk1A00 79.20 Hydrogenase transcriptional regulatory protein hupR1Rhodobacter capsulatus 3.40.50.2300 138 7 78 3.65 4.65
1kjnA00 79.13 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.10160 148 11 83 3.25 3.91
2zayA00 78.92 Response regulator receiver proteinDesulfuromonas acetoxidans DSM 684 3.40.50.2300 123 11 79 3.69 4.62
3cnbA00 78.83 DNA-binding response regulator, merR familyColwellia psychrerythraea 34H 3.40.50.2300 124 5 79 3.59 4.53
2fzvA00 78.81 Shigella flexneriPutative arsenical resistance proteinArsenical resistance protein ArsH 3.40.50.360 235 13 61 2.66 4.34
1y7pB02 78.81 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.40.50.10550 137 9 70 3.18 4.49
1qkkA00 78.80 Sinorhizobium melilotiTwo-component systemTwo-component system, NtrC family, C4-dicarboxylate transport response regulator DctDC4-dicarboxylate transport transcriptional regulatory protein dctD 3.40.50.2300 139 10 79 3.67 4.60
2ayzA00 78.75 Two-component systemTwo-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]Sensor kinase protein rcsCEscherichia coli K-12 3.40.50.2300 133 9 76 3.15 4.12
3gl9B00 78.65 Thermotoga maritimaResponse regulatorTwo-component system, unclassified family, response regulatorProtein binding 3.40.50.2300 118 10 76 3.31 4.33
1dcfA00 78.56 Response to insectResponse to abscisic acid stimulusResponse to heatResponse to gibberellin stimulusDefense response to bacterium 3.40.50.2300 133 6 79 3.91 4.90
2qr3A00 78.52 Bacteroides fragilisTwo-component system response regulator 3.40.50.2300 119 5 77 3.43 4.45
3cz5B00 78.42 Two-component response regulator, LuxR familyAurantimonas manganoxydans SI85-9A1 3.40.50.2300 140 9 79 3.92 4.95
2qzjA00 78.37 Two-component response regulatorClostridium difficile 630 3.40.50.2300 119 7 77 3.70 4.80
1gudA01 78.21 ABC transportersMembraneD-allose transport system substrate-binding proteinD-allose-binding periplasmic proteinEscherichia coli K-12 3.40.50.2300 139 11 79 3.72 4.66
2r25B00 78.16 MAPK signaling pathway - yeastResponse to hydrogen peroxideProtein bindingOsmosensor activityOsomolarity two-component system, sensor histidine kinase SLN1 [EC:2.7.13.3] 3.40.50.2300 131 8 78 3.38 4.31
1srrC00 78.14 Sporulation initiation phosphotransferase FTwo-component system, response regulator, stage 0 sporulation protein FBacillus subtilisTwo-component system 3.40.50.2300 121 9 76 3.38 4.42
2rjnA00 78.04 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainNeptuniibacter caesariensis 3.40.50.2300 135 7 77 3.54 4.55
1mb3A00 77.98 Caulobacter vibrioidesTwo-component systemTwo-component system, cell cycle response regulator DivKPolar differentiation response regulatorCell cycle - Caulobacter 3.40.50.2300 115 8 72 3.43 4.75
1ur5C01 77.97 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 8 68 2.92 4.25
3hhpA01 77.93 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 7 70 3.33 4.70
3gt7A00 77.93 Sensor proteinSyntrophus aciditrophicus SB 3.40.50.2300 131 7 77 3.88 4.99
2aefA01 77.93 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 6 65 2.67 4.05
2g76A01 77.87 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]D-3-phosphoglycerate dehydrogenaseGlycine, serine and threonine metabolismBrain developmentMetabolic pathways 3.40.50.720 112 7 72 3.14 4.35
2qv0A00 77.78 Protein mrkEKlebsiella pneumoniae 3.40.50.2300 122 9 77 3.37 4.37
2fvyA01 77.78 Bacterial chemotaxisABC transportersMethyl-galactoside transport system substrate-binding proteinD-galactose-binding periplasmic proteinEscherichia coli K-12 3.40.50.2300 147 10 79 3.61 4.54
3eq2B01 77.72 Pseudomonas aeruginosaProbable two-component response regulator 3.40.50.2300 103 10 69 3.03 4.36
2jbaA00 77.69 Two-component systemPhosphate regulon transcriptional regulatory protein phoBTwo-component system, OmpR family, phosphate regulon response regulator PhoBProtein bindingEscherichia coli K-12 3.40.50.2300 125 10 79 3.82 4.78
2driA01 77.66 Bacterial chemotaxisABC transportersD-ribose-binding periplasmic proteinRibose transport system substrate-binding proteinMembrane 3.40.50.2300 125 4 73 3.16 4.29
1zgzA00 77.61 Two-component systemTorCAD operon transcriptional regulatory protein torRTwo-component system, OmpR family, torCAD operon response regulator TorRProtein bindingEscherichia coli K-12 3.40.50.2300 118 11 72 3.31 4.54
1a04A01 77.52 Two-component systemTwo-component system, NarL family, nitrate/nitrite response regulator NarLProtein bindingEscherichia coli K-12Nitrate/nitrite response regulator protein narL 3.40.50.2300 124 12 81 3.80 4.68
3bilA01 77.50 Corynebacterium glutamicumPROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR 3.40.50.2300 120 9 76 3.40 4.45
2qxyA00 77.41 Thermotoga maritimaResponse regulatorTwo-component system, unclassified family, response regulator 3.40.50.2300 118 13 77 3.70 4.76
2eggA02 77.39 Shikimate 5-dehydrogenase [EC:1.1.1.25]Geobacillus kaustophilusPhenylalanine, tyrosine and tryptophan biosynthesisShikimate 5-dehydrogenaseMetabolic pathways 3.40.50.720 140 8 70 3.32 4.73
1hyeA01 77.39 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.40.50.720 147 11 68 3.10 4.51
1sc6A01 77.30 Glycine, serine and threonine metabolismMetabolic pathwaysD-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]D-3-phosphoglycerate dehydrogenaseEscherichia coli K-12 3.40.50.720 133 9 77 3.49 4.53
1yl5A01 77.27 Metabolic pathwaysLysine biosynthesisDihydrodipicolinate reductase [EC:1.3.1.26]Dihydrodipicolinate reductaseMycobacterium tuberculosis 3.40.50.720 140 9 76 3.66 4.79
1qo0D01 77.16 Pseudomonas aeruginosaAliphatic amidase regulator 3.40.50.2300 127 8 75 3.21 4.28
2obxA00 77.12 Riboflavin metabolismRiboflavin synthase beta chain [EC:2.5.1.-]6,7-dimethyl-8-ribityllumazine synthase 1Mesorhizobium lotiMetabolic pathways 3.40.50.960 150 9 73 3.44 4.69
1gtzA00 76.94 Phenylalanine, tyrosine and tryptophan biosynthesis3-dehydroquinate dehydratase II [EC:4.2.1.10]Streptomyces coelicolor3-dehydroquinate dehydrataseMetabolic pathways 3.40.50.9100 149 6 79 3.85 4.82
1t2dA01 76.86 L-lactate dehydrogenaseCysteine and methionine metabolismGlycolysis / GluconeogenesisPyruvate metabolismPlasmodium falciparum CDC/Honduras 3.40.50.720 148 6 66 2.99 4.52
1dbqA01 76.78 LacI family transcriptional regulator, purine nucleotide synthesis repressorHTH-type transcriptional repressor purREscherichia coli K-12 3.40.50.2300 134 8 78 3.74 4.77
1p2fA01 76.50 Thermotoga maritimaResponse regulatorTwo-component system, OmpR family, response regulator 3.40.50.2300 117 11 74 3.69 4.97
2qvgA00 76.43 Two component response regulator[EC:2.7.3.-]Legionella pneumophila subsp. pneumophila str. Philadelphia 1 3.40.50.2300 126 6 79 3.87 4.85
2qu7A01 76.11 Putative transcriptional regulatorStaphylococcus saprophyticus subsp. saprophyticus ATCC 15305 3.40.50.2300 129 9 75 3.46 4.61
3cu5B00 75.97 Clostridium phytofermentans ISDgTwo component transcriptional regulator, AraC family 3.40.50.2300 129 5 81 3.80 4.68
1t3gB00 75.96 Plasma membraneInterleukin 1 receptor accessory protein-likeHomo sapiensNegative regulation of exocytosisProtein binding 3.40.50.10140 146 7 94 4.43 4.69
1r8jB01 75.92 Circadian clock protein kaiAIdentical protein bindingCircadian clock protein KaiAEntrainment of circadian clockSynechococcus elongatus PCC 7942 3.40.50.2300 149 7 71 2.99 4.16
3ctpA01 75.90 Alkaliphilus metalliredigens QYMFPeriplasmic binding protein/LacI transcriptional regulator 3.40.50.2300 128 7 72 3.39 4.69
1moqA02 75.75 Amino sugar and nucleotide sugar metabolismMetabolic pathwaysAlanine, aspartate and glutamate metabolismGlucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]UDP-N-acetylglucosamine biosynthetic process 3.40.50.10490 148 8 81 3.97 4.86
1vm6B01 75.69 Dihydrodipicolinate reductase [EC:1.3.1.26]Thermotoga maritimaDihydrodipicolinate reductaseLysine biosynthesisMetabolic pathways 3.40.50.720 135 5 77 3.84 4.98
2rdmA00 75.67 Response regulator receiver proteinSinorhizobium medicae WSM419 3.40.50.2300 117 5 72 3.56 4.88
3d8uB01 75.57 Putative transcriptional regulatorVibrio parahaemolyticusLacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor 3.40.50.2300 119 7 73 3.32 4.51
3cs3A01 75.52 Sugar-binding transcriptional regulator, LacI familyLacI family transcriptional regulatorEnterococcus faecalis 3.40.50.2300 122 8 71 3.43 4.80
1gdhA01 75.39 Glycerate dehydrogenaseHyphomicrobium methylovorum 3.40.50.720 128 8 77 3.63 4.67
1mx3A01 75.38 Protein domain specific bindingTranscription factor bindingProtein C-terminus bindingViral genome replicationC-terminal-binding protein 1 3.40.50.720 132 12 78 3.77 4.80
3cg4A00 74.98 Response regulator receiver domain protein (CheY-like)Methanospirillum hungatei JF-1 3.40.50.2300 115 11 73 3.63 4.93
3beoA02 74.89 Amino sugar and nucleotide sugar metabolismMetabolic pathwaysBacillus anthracisUDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]UDP-N-acetylglucosamine 2-epimerase 3.40.50.2000 161 12 68 3.33 4.87
1vi2A02 73.01 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysQuinate/shikimate dehydrogenaseQuinate/shikimate dehydrogenase [EC:1.1.1.282]Shikimate 5-dehydrogenase activity 3.40.50.720 147 7 70 3.44 4.86
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Displaying entries 1 to 70 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ohhA02
RVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESGAIALGAPTIYDEPYPSVGDLLMYLRGLK
FNRTLTRKALVFGSMGGNGGATGTMKELLAEAGFDVACEEEVYYVPTGDELDACFEAGRKLAAE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ohhA02
RVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESGAIALGAPTIYDEPYPSVGDLLMYLRGLK
FNRTLTRKALVFGSMGGNGGATGTMKELLAEAGFDVACEEEVYYVPTGDELDACFEAGRKLAAE
BLAST against CATH

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Domain History Events (10)

Domain assigned by auto on 15 Aug 2007 03:04

Assigning to "3.40.50.360" based on similarity with "2ohjB02"

Flow stage update by auto on 15 Aug 2007 02:40

No in_process hits for Domain "2ohhA02" ready to be processed

Update comment by auto on 15 Aug 2007 01:41

Domain "2ohhA02" hits Domain "2ohhE02" (100% over 100%) which is currently in process

Update comment by auto on 15 Aug 2007 00:09

Domain "2ohhA02" hits Domain "2ohjB02" (100% over 100%) which is currently in process

Update comment by auto on 14 Aug 2007 22:51

Domain "2ohhA02" hits Domain "2ohiH02" (100% over 100%) which is currently in process

Flow stage update by auto on 02 Aug 2007 10:35

Domain "2ohhA02" hits Domain "2ohhB02" (100% over 100%) which is currently in process

Flow stage update by auto on 02 Aug 2007 10:34

NW result present for Domain "2ohhA02"

Flow stage update by auto on 16 Jul 2007 22:39

All required files are present for Domain "2ohhA02"

Flow stage update by auto on 15 Jul 2007 15:08

Beginning processing for Domain "2ohhA02"

Insertion by auto on 15 Jul 2007 14:27

Final ChopClose added based on similarity with "2ohhB"