CATH Domain: 2o8tA01 XML data for domain: 2o8tA01

Molscript image for 2o8tA01
2o8tA01
PDB coordinates for domain 2o8tA01

PDB 2o8t, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.10 Thrombin, subunit H
2.40.10.10 Trypsin-like serine proteases Gene3D
2.40.10.10.45
2.40.10.10.45.1
2.40.10.10.45.1.1
2.40.10.10.45.1.1.1
2.40.10.10.45.1.1.1.1

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Segment boundaries for domain 2o8tA01

Chopping figure for domain 2o8tA01
DomainStart PDB ResidueStop PDB Residue
2o8tA01 16 27
2o8tA01 121 232
2o8tA02 28 120
2o8tA02 233 242

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 2.40.10.10.45.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1k2i101 91.25 Bos taurusChymotrypsinogen A 2.40.10.10 118 40 92 1.54 1.67
1elvA02 89.63 Serine-type endopeptidase activitySystemic lupus erythematosusComplement C1s subcomponentHomo sapiensComplement component 1, s subcomponent [EC:3.4.21.42] 2.40.10.10 126 30 92 2.19 2.36
1q3xA02 89.62 Serine-type endopeptidase activityHomo sapiensMannan-binding lectin serine protease 2Calcium-dependent protein bindingComplement activation, lectin pathway 2.40.10.10 137 31 90 1.77 1.96
2asuB01 89.58 Hepatocyte growth factor-like proteinHomo sapiens 2.40.10.10 122 32 94 2.27 2.40
2hlcA02 89.56 CollagenaseHypoderma lineatum 2.40.10.10 126 26 91 1.84 2.01
3gylB01 89.51 ProstasinPlasma membraneProtease, serine, 8 (prostasin) [EC:3.4.21.-]Homo sapiensExtracellular space 2.40.10.10 133 39 93 2.23 2.37
1si5H01 88.34 Pathways in cancerHepatocyte growth factorEpithelial to mesenchymal transitionRenal cell carcinomaCytokine-cytokine receptor interaction 2.40.10.10 119 29 92 2.08 2.26
1y8tB02 79.97 Two-component systemPutative serine protease PepD [EC:3.4.21.-]PROBABLE SERINE PROTEASE PEPD (SERINE PROTEINASE) (MTB32B)Mycobacterium tuberculosis 2.40.10.10 111 15 66 2.29 3.45
2qf3B02 79.58 Protease degSProtein bindingSerine protease DegS [EC:3.4.21.-]Escherichia coli K-12 2.40.10.10 103 14 71 2.94 4.14
1dleB02 79.37 Complement factor BComplement bindingHomo sapiensComponent factor B [EC:3.4.21.47]Complement and coagulation cascades 2.40.10.10 142 18 73 2.89 3.95
1svpA02 72.24 Sindbis virusStructural polyprotein 2.40.10.10 86 9 54 2.37 4.33
3fanA02 70.92 Porcine reproductive and respiratory syndrome virusNon-structural protein 2.40.10.10 69 18 49 2.38 4.84
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2o8tA01
IIGGEFTTIENQIALPSMYNDPQFGTSCEITGFGKEQSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP
QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2o8tA01
IIGGEFTTIENQIALPSMYNDPQFGTSCEITGFGKEQSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP
QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVS
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Dec 2007 14:14

Assigning to "2.40.10.10" based on similarity with "2nwnA01"

Flow stage update by auto on 29 Dec 2007 14:04

No in_process hits for Domain "2o8tA01" ready to be processed

Flow stage update by auto on 29 Dec 2007 14:04

NW result present for Domain "2o8tA01"

Flow stage update by auto on 29 Dec 2007 08:06

All required files are present for Domain "2o8tA01"

Flow stage update by auto on 28 Dec 2007 08:16

Beginning processing for Domain "2o8tA01"

Insertion by auto on 28 Dec 2007 08:05

Final ChopClose added based on similarity with "2nwnA"