CATH Domain: 2nt0A02 XML data for domain: 2nt0A02

Molscript image for 2nt0A02
2nt0A02
PDB coordinates for domain 2nt0A02

PDB 2nt0, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1180 Golgi alpha-mannosidase II Gene3D
2.60.40.1180.14
2.60.40.1180.14.1
2.60.40.1180.14.1.1
2.60.40.1180.14.1.1.1
2.60.40.1180.14.1.1.1.1

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Segment boundaries for domain 2nt0A02

Chopping figure for domain 2nt0A02
DomainStart PDB ResidueStop PDB Residue
2nt0A01 5 30
2nt0A01 78 431
2nt0A02 35 77
2nt0A02 432 497

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.60.40.1180.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3clwC01 84.06 Bacteroides fragilis NCTC 9343Conserved hypothetical exported protein 2.60.40.1180 100 10 66 1.62 2.42
1wzlA04 76.90 Neopullulanase 2Thermoactinomyces vulgaris 2.60.40.1180 83 14 59 2.60 4.36
2bs9A01 76.47 Geobacillus stearothermophilusBeta-xylosidase 2.60.40.1500 136 7 53 2.12 3.95
1m7xA03 75.32 Starch and sucrose metabolismMetabolic pathways1,4-alpha-glucan branching enzyme [EC:2.4.1.18]Glycogen biosynthetic process1,4-alpha-glucan-branching enzyme 2.60.40.1180 106 8 62 2.78 4.46
3cc1A02 75.16 BH1870 proteinBacillus halodurans 2.60.40.1180 84 9 56 2.28 4.01
1j0hA04 74.84 NeopullulanaseGeobacillus stearothermophilus 2.60.40.1180 83 18 60 2.50 4.13
1uokA03 74.79 Bacillus cereusOligo-1,6-glucosidase 2.60.40.1180 78 5 56 2.71 4.76
1zjaA03 74.23 Pseudomonas mesoacidophilaSucrose isomerase 2.60.40.1180 78 12 56 2.78 4.89
1ea9C04 72.39 Bacillus sp.Cyclomaltodextrinase 2.60.40.1180 81 11 58 2.61 4.45
1lwjA03 71.99 4-alpha-glucanotransferase [EC:2.4.1.25]Thermotoga maritimaStarch and sucrose metabolism4-alpha-glucanotransferaseMetabolic pathways 2.60.40.1180 50 14 45 2.10 4.58
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2nt0A02
GTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDV
PLTIKDPAVGFLETISPGYSIHTYLWHRQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2nt0A02
GTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDV
PLTIKDPAVGFLETISPGYSIHTYLWHRQ
BLAST against CATH

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Domain History Events (12)

Classification merge by cuff on 27 Jun 2008 15:54

COMMENT: merge 2.60.360.10 -> 2.60.40.1180 FINAL: merge 2.60.360.10 -> 2.60.40.1180*

Domain assigned by auto on 13 Jan 2007 19:34

Assigning to "2.60.360.10" based on similarity with "2nt0C02"

Flow stage update by auto on 13 Jan 2007 19:33

No in_process hits for Domain "2nt0A02" ready to be processed

Update comment by auto on 13 Jan 2007 15:50

Domain "2nt0A02" hits Domain "2nt1A02" (100% over 100%) which is currently in process

Update comment by auto on 13 Jan 2007 11:44

Domain "2nt0A02" hits Domain "2nt1D02" (100% over 100%) which is currently in process

Update comment by auto on 13 Jan 2007 07:35

Domain "2nt0A02" hits Domain "2nt1C02" (100% over 100%) which is currently in process

Update comment by auto on 13 Jan 2007 03:46

Domain "2nt0A02" hits Domain "2nt1B02" (100% over 100%) which is currently in process

Flow stage update by auto on 13 Jan 2007 03:41

Domain "2nt0A02" hits Domain "2nt1B02" (100% over 100%) which is currently in process

Flow stage update by auto on 13 Jan 2007 03:41

NW result present for Domain "2nt0A02"

Flow stage update by auto on 10 Jan 2007 19:35

All required files are present for Domain "2nt0A02"

Flow stage update by auto on 09 Jan 2007 15:38

Beginning processing for Domain "2nt0A02"

Insertion by auto on 09 Jan 2007 15:31

Final ChopClose added based on similarity with "1ogsA"