CATH Domain: 2nspA00 XML data for domain: 2nspA00

Molscript image for 2nspA00
2nspA00
PDB coordinates for domain 2nspA00

PDB 2nsp, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.160 3 Solenoid
2.160.20 Pectate Lyase C-like
2.160.20.10 Single-stranded right-handed beta-helix, Pectin lyase-like Gene3D
2.160.20.10.7
2.160.20.10.7.1
2.160.20.10.7.1.1
2.160.20.10.7.1.1.1
2.160.20.10.7.1.1.1.1

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Segment boundaries for domain 2nspA00

Chopping figure for domain 2nspA00
DomainStart PDB ResidueStop PDB Residue
2nspA00 25 366

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 2.160.20.10.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gq8A00 87.09 PectinesteraseDaucus carota 2.160.20.10 318 29 85 1.91 2.24
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2nspA00
ATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTPFVILIKNGVYNERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDG
SKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG
GRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESDSVPAKSYG
LGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIYGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVSKDRRQL
TDAQAAEYTQSKVLGDWTPTLP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2nspA00
ATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTPFVILIKNGVYNERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDG
SKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG
GRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESDSVPAKSYG
LGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIYGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVSKDRRQL
TDAQAAEYTQSKVLGDWTPTLP
BLAST against CATH

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Domain History Events (10)

Domain assigned by auto on 27 Nov 2007 02:52

Assigning to "2.160.20.10" based on similarity with "2nspB00"

Flow stage update by auto on 27 Nov 2007 02:52

No in_process hits for Domain "2nspA00" ready to be processed

Update comment by auto on 27 Nov 2007 02:48

Domain "2nspA00" hits Domain "2nstB00" (100% over 100%) which is currently in process

Update comment by auto on 27 Nov 2007 02:37

Domain "2nspA00" hits Domain "2nspB00" (100% over 100%) which is currently in process

Update comment by auto on 26 Nov 2007 22:26

Domain "2nspA00" hits Domain "2nstA00" (100% over 100%) which is currently in process

Flow stage update by auto on 26 Nov 2007 22:16

Domain "2nspA00" hits Domain "2nstA00" (100% over 100%) which is currently in process

Flow stage update by auto on 26 Nov 2007 22:15

NW result present for Domain "2nspA00"

Flow stage update by auto on 24 Nov 2007 14:37

All required files are present for Domain "2nspA00"

Flow stage update by auto on 23 Nov 2007 14:01

Beginning processing for Domain "2nspA00"

Insertion by auto on 23 Nov 2007 10:22

Final ChopClose added based on similarity with "1qjvA"