CATH Domain: 2nlrA00 XML data for domain: 2nlrA00

Molscript image for 2nlrA00
2nlrA00
PDB coordinates for domain 2nlrA00

PDB 2nlr, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.180 Gene3D
2.60.120.180.2
2.60.120.180.2.1
2.60.120.180.2.1.1
2.60.120.180.2.1.1.1
2.60.120.180.2.1.1.1.1

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Segment boundaries for domain 2nlrA00

Chopping figure for domain 2nlrA00
DomainStart PDB ResidueStop PDB Residue
2nlrA00 1 222

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.60.120.180.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2bw8A00 92.12 Rhodothermus marinusCellulase 2.60.120.180 226 32 96 1.15 1.19
1olrA00 87.51 Humicola griseaEndoglucanase 2.60.120.180 223 24 93 1.77 1.89
2vg9A00 82.32 Neocallimastix patriciarumBifunctional endo-1,4-beta-xylanase A 2.60.120.180 217 8 89 3.35 3.76
1t6gC00 77.55 Aspergillus nigerEndo-1,4-beta-xylanase A 2.60.120.180 182 13 77 3.47 4.50
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2nlrA00
DTTICEPFGTTTIQGRYVVQNNRWGSTAPQCVTATDTGFRVTQADGSAPTNGAPKSYPSVFNGCHYTNCSPGTDLPVRLD
TVSAAPSSISYGFVDGAVYNASYDIWLDPTARTDGVNQTEIMIWFNRVGPIQPIGSPVGTASVGGRTWEVWSGGNGSNDV
LSFVAPSAISGWSFDVMDFVRATVARGLAENDWYLTSVQAGFEPWQNGAGLAVNSFSSTVET
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2nlrA00
DTTICEPFGTTTIQGRYVVQNNRWGSTAPQCVTATDTGFRVTQADGSAPTNGAPKSYPSVFNGCHYTNCSPGTDLPVRLD
TVSAAPSSISYGFVDGAVYNASYDIWLDPTARTDGVNQTEIMIWFNRVGPIQPIGSPVGTASVGGRTWEVWSGGNGSNDV
LSFVAPSAISGWSFDVMDFVRATVARGLAENDWYLTSVQAGFEPWQNGAGLAVNSFSSTVETGTPGGTDPGDPG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:05

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"