CATH Domain: 2napA02 XML data for domain: 2napA02

Molscript image for 2napA02
2napA02
PDB coordinates for domain 2napA02

PDB 2nap, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.740 Gene3D
3.40.50.740.6
3.40.50.740.6.1
3.40.50.740.6.1.1
3.40.50.740.6.1.1.1
3.40.50.740.6.1.1.1.1

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Segment boundaries for domain 2napA02

Chopping figure for domain 2napA02
DomainStart PDB ResidueStop PDB Residue
2napA01 4 61
2napA02 62 139
2napA02 346 562
2napA03 140 345
2napA03 563 594
2napA04 610 723

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.50.740.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2vpzA02 77.55 Thermus thermophilus HB27Thiosulfate reductase [EC:1.-.-.-]Thiosulfate reductase 3.40.50.740 171 23 55 2.02 3.63
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2napA02
RVTQPLVRRHKGGKLEPVSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCLTEESYVANKIFKGGFGTNNVDGNPRLQP
NACGGVRDGGALSHLLPAGRAIPNAKHRAEMEKLWGLPEGRIAPEPGYHTVALFEALGRGDVKCMIICETNPAHTLPNLN
KVHKAMSHPESFIVCIEAFPDAVTLEYADLVLPPAFWCERDGVYGCGERRYSLTEKAVDPPGQCRPTVNTLVEFARRAGV
DPQLVNFRNAEDVWNEWRMVSKGTTYDFWGMTRERLRKESGLIWPCPSEDHPGTS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2napA02
RVTQPLVRRHKGGKLEPVSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCLTEESYVANKIFKGGFGTNNVDGNPRLQP
NACGGVRDGGALSHLLPAGRAIPNAKHRAEMEKLWGLPEGRIAPEPGYHTVALFEALGRGDVKCMIICETNPAHTLPNLN
KVHKAMSHPESFIVCIEAFPDAVTLEYADLVLPPAFWCERDGVYGCGERRYSLTEKAVDPPGQCRPTVNTLVEFARRAGV
DPQLVNFRNAEDVWNEWRMVSKGTTYDFWGMTRERLRKESGLIWPCPSEDHPGTS
BLAST against CATH

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Domain History Events (7)

Domain assigned by lewis on 19 Jan 2007 16:21

Assigning domain 2napA02 to 3.40.50.740 (as agreed with the CATH update team) after the chain has been rechopped. The reason is that the domain is very similar to an old domain (from the previous chopping) which was in 3.40.50.740 at the time the chain was unchopped.

Flow stage update by auto on 22 Dec 2006 23:35

No satisfactory AssignClose result found.

Flow stage update by auto on 22 Dec 2006 23:31

No in_process hits for Domain "2napA02" ready to be processed

Flow stage update by auto on 22 Dec 2006 23:31

NW result present for Domain "2napA02"

Flow stage update by auto on 18 Dec 2006 15:29

All required files are present for Domain "2napA02"

Flow stage update by auto on 18 Dec 2006 15:29

Beginning processing for Domain "2napA02"

Insertion by cuff on 18 Dec 2006 12:59

nice selection of choppings