CATH Domain: 2nacA02 XML data for domain: 2nacA02

Molscript image for 2nacA02
2nacA02
PDB coordinates for domain 2nacA02

PDB 2nac, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.33
3.40.50.720.33.1
3.40.50.720.33.1.1
3.40.50.720.33.1.1.1
3.40.50.720.33.1.1.1.1

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Segment boundaries for domain 2nacA02

Chopping figure for domain 2nacA02
DomainStart PDB ResidueStop PDB Residue
2nacA01 1 145
2nacA01 336 374
2nacA02 146 335

Structural Neighbourhood (22 entries)

There are 22 matching structural neighberhood comparisons for CATH ID 3.40.50.720.33.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 22 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gdhA02 91.07 Glycerate dehydrogenaseHyphomicrobium methylovorum 3.40.50.720 184 30 95 1.43 1.50
1mx3A02 90.68 Protein domain specific bindingTranscription factor bindingProtein C-terminus bindingViral genome replicationC-terminal-binding protein 1 3.40.50.720 194 33 96 1.75 1.81
2gcgA02 90.10 Glyoxylate reductase (NADP+) [EC:1.1.1.79]Hydroxypyruvate reductase activityExcretionPyruvate metabolismNAD or NADH binding 3.40.50.720 189 30 97 1.84 1.88
3k5pA02 88.78 Glycine, serine and threonine metabolismMetabolic pathwaysD-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]Brucella melitensis biovar Abortus 2308Amino acid-binding ACT:D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain:D-isomer specific 2-hydroxyacid dehydr... 3.40.50.720 180 30 91 1.85 2.02
1xdwA02 87.89 3.40.50.720 197 23 92 1.84 1.98
1qp8A02 87.01 Pyrobaculum aerophilum2-hydroxyacid dehydrogenase 3.40.50.720 179 21 93 2.09 2.23
3d4oA02 80.45 Dipicolinate synthase subunit ABacillus haloduransDipicolinate synthase subunit A 3.40.50.720 139 14 66 2.35 3.54
1o0sA04 80.07 NAD-dependent malic enzyme, mitochondrialAscaris suum 3.40.50.720 185 9 82 3.62 4.41
1pjcA02 79.91 Alanine dehydrogenasePhormidium lapideum 3.40.50.720 176 9 77 3.51 4.51
1ml4A02 79.63 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Pyrococcus abyssiAspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolism 3.40.50.1370 158 13 71 3.12 4.36
1l7eA01 79.36 Rhodospirillum rubrumNAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]Nicotinate and nicotinamide metabolismMetabolic pathwaysNAD(P) transhydrogenase subunit alpha part 1 3.40.50.720 177 10 73 3.40 4.65
3d6nB02 78.92 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Aspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolismMetabolic pathways 3.40.50.1370 144 9 65 3.00 4.56
3grfA02 78.60 Arginine and proline metabolismGiardia intestinalisOrnithine carbamoyltransferaseOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathways 3.40.50.1370 165 7 72 3.21 4.45
1othA02 77.66 Arginine and proline metabolismHomo sapiensOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathwaysOrnithine carbamoyltransferase, mitochondrial 3.40.50.1370 159 8 70 3.30 4.71
1duvG02 77.24 Arginine and proline metabolismMetabolic pathwaysOrnithine carbamoyltransferase activityOrnithine carbamoyltransferase [EC:2.1.3.3]Ornithine carbamoyltransferase chain I 3.40.50.1370 183 7 71 3.39 4.77
1h2bA02 76.80 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysAeropyrum pernix 3.40.50.720 140 10 67 3.19 4.70
1bgvA01 76.47 NAD-specific glutamate dehydrogenaseClostridium symbiosum 3.40.50.720 167 7 72 3.54 4.87
1vj0A02 76.17 Butanoate metabolismThermotoga maritima[EC:1.1.1.-]Alcohol dehydrogenase, zinc-containingFructose and mannose metabolism 3.40.50.720 147 11 67 3.26 4.80
1pqwA00 75.98 PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSCPhenolpthiocerol synthesis type-I polyketide synthase CMycobacterium tuberculosis 3.40.50.720 183 8 68 3.30 4.79
1wlyA02 75.33 2-haloacrylate reductaseBurkholderia sp. WS 3.40.50.720 147 10 70 3.52 4.99
1npyA02 74.30 Shikimate 5-dehydrogenase [EC:1.1.1.25]Haemophilus influenzaePhenylalanine, tyrosine and tryptophan biosynthesisShikimate 5-dehydrogenase-like protein HI_0607Metabolic pathways 3.40.50.720 169 6 71 3.27 4.60
1iz0A02 74.25 NADPH2:quinone reductase [EC:1.6.5.5]Probable quinone oxidoreductaseThermus thermophilus 3.40.50.720 152 13 62 3.01 4.85
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Displaying entries 1 to 22 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2nacA02
NSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRL
PESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGY
AGDVWFPQPAPKDHPWRTMPYNGMTPHISG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2nacA02
NSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRL
PESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGY
AGDVWFPQPAPKDHPWRTMPYNGMTPHISG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:55

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"