CATH Domain: 2lisA00 XML data for domain: 2lisA00

Molscript image for 2lisA00
2lisA00
PDB coordinates for domain 2lisA00

PDB 2lis, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.150 Lysin
1.20.150.10 Gene3D
1.20.150.10.1
1.20.150.10.1.1
1.20.150.10.1.1.1
1.20.150.10.1.1.1.1
1.20.150.10.1.1.1.1.1

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Segment boundaries for domain 2lisA00

Chopping figure for domain 2lisA00
DomainStart PDB ResidueStop PDB Residue
2lisA00 4 134

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.20.150.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gakA00 84.59 Fertilization proteinHaliotis fulgens 1.20.150.10 137 16 92 4.43 4.78
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2lisA00
HYVEPKFLNKAFEVALKVQIIAGFDRGLVKWLRVHGRTLSTVQKKALYFVNRRYMQTHWANYMLWINKKIDALGRTPVVG
DYTRLGAEIGRRIDMAYFYDFLKDKNMIPKYLPYMEEINRMRPADVPVKYM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2lisA00
RSWHYVEPKFLNKAFEVALKVQIIAGFDRGLVKWLRVHGRTLSTVQKKALYFVNRRYMQTHWANYMLWINKKIDALGRTP
VVGDYTRLGAEIGRRIDMAYFYDFLKDKNMIPKYLPYMEEINRMRPADVPVKYMGK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"