CATH Domain: 2jzcA00 XML data for domain: 2jzcA00

Molscript image for 2jzcA00
2jzcA00
PDB coordinates for domain 2jzcA00

PDB 2jzc, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.2000 Glycogen Phosphorylase B; Gene3D
3.40.50.2000.16
3.40.50.2000.16.1
3.40.50.2000.16.1.1
3.40.50.2000.16.1.1.1
3.40.50.2000.16.1.1.1.1

Segment boundaries for domain 2jzcA00

Chopping figure for domain 2jzcA00
DomainStart PDB ResidueStop PDB Residue
2jzcA00 24 224

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


Domain ATOM Sequence

>pdb|2jzcA00
GIIEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDT
ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWS
CAPTETGLIAGLRASQTEKLKPFPVSHNPSFERLLVETIYS    

Domain COMBS Sequence

>pdb|2jzcA00
GIIEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDT
ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWS
CAPTETGLIAGLRASQTEKLKPFPVSHNPSFERLLVETIYS    

Domain History Events (91)

Domain assigned by cuff on 23 Feb 2009 17:14

same superfamily

Domain assignment manual match h by cuff on 23 Feb 2009 17:13

homology match

Homcheck allotment by cuff on 10 Feb 2009 16:38

User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by cuff on 10 Feb 2009 16:38

User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by auto on 07 Nov 2008 03:52

Domain "2jzcA00" SCOP scan with no results - no SCOP mapping

Domain scan scop cath by auto on 07 Nov 2008 03:51

Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2jzcA00

Flow stage update by auto on 07 Nov 2008 03:50

Retrieved PRC_PFAMCATH results for job ID SID1971244502282464 and results inserted.

Domain scan prc pfamcath by auto on 07 Nov 2008 03:49

Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 4 results for 2jzcA00

Update comment by auto on 06 Nov 2008 23:40

PRC_PFAMCATH job SID1971244502282464 is not yet finished.

Flow stage update by auto on 06 Nov 2008 23:38

The entry "2jzcA00" has been submitted to the PRC_PFAMCATH webservice.

Prc pfamcath submit by auto on 06 Nov 2008 23:38

The entry "2jzcA00" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 06 Nov 2008 23:29

Retrieved SSAP results for job ID SID4758126388341568 and results inserted.

Domain scan ssap cath by auto on 06 Nov 2008 23:25

Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 1340 results for 2jzcA00

Update comment by auto on 03 Nov 2008 17:52

SSAP job SID4758126388341568 is not yet finished.

Ssap cath submit by auto on 03 Nov 2008 17:42

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 03 Nov 2008 17:42

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 03 Nov 2008 14:38

Giving up on SSAP job SID6991452130562592 because submission time of Tue Oct 28 12:20:55 2008 is more than 518400 seconds older than current time (Mon Nov 3 14:38:26 2008).

Update comment by auto on 28 Oct 2008 12:46

SSAP job SID6991452130562592 is not yet finished.

Ssap cath submit by auto on 28 Oct 2008 12:20

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 28 Oct 2008 12:20

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 28 Oct 2008 09:07

Giving up on SSAP job SID3810317801578848 because submission time of Wed Oct 22 09:34:07 2008 is more than 518400 seconds older than current time (Tue Oct 28 09:07:07 2008).

Update comment by auto on 22 Oct 2008 09:47

SSAP job SID3810317801578848 is not yet finished.

Flow stage update by auto on 22 Oct 2008 09:34

The entry "2jzcA00" has been submitted to the SSAP webservice.

Ssap cath submit by auto on 22 Oct 2008 09:34

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 22 Oct 2008 06:29

Giving up on SSAP job SID0790701318096392 because submission time of Thu Oct 16 06:10:17 2008 is more than 518400 seconds older than current time (Wed Oct 22 06:29:51 2008).

Update comment by auto on 16 Oct 2008 06:28

SSAP job SID0790701318096392 is not yet finished.

Flow stage update by auto on 16 Oct 2008 06:10

The entry "2jzcA00" has been submitted to the SSAP webservice.

Ssap cath submit by auto on 16 Oct 2008 06:10

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 16 Oct 2008 03:46

Giving up on SSAP job SID6416409487207936 because submission time of Fri Oct 10 03:16:16 2008 is more than 518400 seconds older than current time (Thu Oct 16 03:46:35 2008).

Update comment by auto on 10 Oct 2008 03:50

SSAP job SID6416409487207936 is not yet finished.

Ssap cath submit by auto on 10 Oct 2008 03:16

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 10 Oct 2008 03:16

The entry "2jzcA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 10 Oct 2008 02:36

Retrieved PRC results for job ID SID1486294865710376 and inserted them into the database.

Domain scan prc cath by auto on 10 Oct 2008 02:35

Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 3 results for 2jzcA00

Update comment by auto on 09 Oct 2008 06:53

PRC job SID1486294865710376 is not yet finished.

Flow stage update by auto on 09 Oct 2008 06:28

The entry "2jzcA00" has been submitted to the PRC webservice.

Prc cath submit by auto on 09 Oct 2008 06:28

The entry "2jzcA00" has been submitted to the PRC webservice.

Flow stage update by auto on 09 Oct 2008 06:15

Retrieved HMM(SAM) results for job ID SID8305494921333480 and inserted them into the database.

Domain scan sam cath by auto on 09 Oct 2008 06:15

Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 2 results for 2jzcA00

Update comment by auto on 06 Oct 2008 00:28

HMM(SAM) job SID8305494921333480 is not yet finished.

Sam cath submit by auto on 05 Oct 2008 23:51

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 05 Oct 2008 23:51

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 05 Oct 2008 20:58

Unable to retrieve "2jzcA00" HMM(SAM) results for job "SID6107189224591684"

Update comment by auto on 03 Oct 2008 04:00

HMM(SAM) job SID6107189224591684 is not yet finished.

Sam cath submit by auto on 03 Oct 2008 03:38

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 03 Oct 2008 03:38

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 03 Oct 2008 00:44

Unable to retrieve "2jzcA00" HMM(SAM) results for job "SID0612987042422036"

Update comment by auto on 02 Oct 2008 21:10

HMM(SAM) job SID0612987042422036 is not yet finished.

Flow stage update by auto on 02 Oct 2008 20:48

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 02 Oct 2008 20:48

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 02 Oct 2008 18:31

Unable to retrieve "2jzcA00" HMM(SAM) results for job "SID7053621072231072"

Update comment by auto on 02 Oct 2008 15:19

HMM(SAM) job SID7053621072231072 is not yet finished.

Sam cath submit by auto on 02 Oct 2008 14:56

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 02 Oct 2008 14:56

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 02 Oct 2008 12:17

Unable to retrieve "2jzcA00" HMM(SAM) results for job "SID1125067601888480"

Update comment by auto on 02 Oct 2008 03:55

HMM(SAM) job SID1125067601888480 is not yet finished.

Sam cath submit by auto on 02 Oct 2008 03:25

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 02 Oct 2008 03:25

The entry "2jzcA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 02 Oct 2008 02:47

Retrieved "2jzcA00" CATHEDRAL results for job ID SID5348747046184820 and inserted them into the database.

Domain scan cathedral cath by auto on 02 Oct 2008 02:45

Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 464 results for 2jzcA00

Update comment by auto on 29 Sep 2008 04:17

"2jzcA00" CATHEDRAL job SID5348747046184820 is not yet finished.

Flow stage update by auto on 29 Sep 2008 04:03

The entry "2jzcA00" has been submitted to the CATHEDRAL webservice.

Cathedral cath submit by auto on 29 Sep 2008 04:03

The entry "2jzcA00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 28 Sep 2008 20:45

Giving up on "2jzcA00" CATHEDRAL job SID9925687073563576 because submission time of Mon Sep 22 19:02:41 2008 is more than 518400 seconds older than current time (Sun Sep 28 20:45:13 2008).

Update comment by auto on 22 Sep 2008 19:13

"2jzcA00" CATHEDRAL job SID9925687073563576 is not yet finished.

Cathedral cath submit by auto on 22 Sep 2008 19:02

The entry "2jzcA00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 22 Sep 2008 19:02

The entry "2jzcA00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 22 Sep 2008 15:37

Giving up on "2jzcA00" CATHEDRAL job SID1535238633242140 because submission time of Tue Sep 16 15:04:09 2008 is more than 518400 seconds older than current time (Mon Sep 22 15:37:19 2008).

Update comment by auto on 16 Sep 2008 15:15

"2jzcA00" CATHEDRAL job SID1535238633242140 is not yet finished.

Cathedral cath submit by auto on 16 Sep 2008 15:04

The entry "2jzcA00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 16 Sep 2008 15:04

The entry "2jzcA00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 16 Sep 2008 14:48

ScanList with 11996 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2jzcA00.scanlist" for "2jzcA00"

Write scan list by auto on 16 Sep 2008 14:47

Writing ScanList containing 11996 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2jzcA00.scanlist" for domain "2jzcA00"

Update comment by auto on 16 Sep 2008 11:22

Waiting for 27 new domains (example : 2qwvB00) to be processed so that they can be scanned against too.

Update comment by auto on 15 Sep 2008 22:07

Waiting for 40 new domains (example : 2honA01) to be processed so that they can be scanned against too.

Update comment by auto on 15 Sep 2008 17:29

Waiting for 77 new domains (example : 2o6iA01) to be processed so that they can be scanned against too.

Update comment by auto on 15 Sep 2008 15:21

Waiting for 114 new domains (example : 2r7bA02) to be processed so that they can be scanned against too.

Update comment by auto on 15 Sep 2008 11:23

Waiting for 163 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Update comment by auto on 15 Sep 2008 10:00

Waiting for 246 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Update comment by auto on 15 Sep 2008 03:26

Waiting for 269 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Update comment by auto on 14 Sep 2008 23:24

Waiting for 305 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Update comment by auto on 14 Sep 2008 21:06

Waiting for 360 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Update comment by auto on 14 Sep 2008 17:36

Waiting for 411 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Update comment by auto on 14 Sep 2008 14:48

Waiting for 507 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Update comment by auto on 14 Sep 2008 08:51

Waiting for 561 new domains (example : 2c00A01) to be processed so that they can be scanned against too.

Flow stage update by auto on 14 Sep 2008 08:50

No satisfactory AssignClose result found.

Flow stage update by auto on 14 Sep 2008 08:30

No in_process hits for Domain "2jzcA00" ready to be processed

Flow stage update by auto on 14 Sep 2008 08:30

NW result present for Domain "2jzcA00"

Flow stage update by auto on 11 Sep 2008 11:06

All required files are present for Domain "2jzcA00"

Flow stage update by auto on 10 Sep 2008 17:44

Beginning processing for Domain "2jzcA00"

Insertion by cuff on 10 Sep 2008 11:51

nice chopping