CATH Domain: 2jmpA01 XML data for domain: 2jmpA01

Molscript image for 2jmpA01
2jmpA01
PDB coordinates for domain 2jmpA01

PDB 2jmp, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.300 GMP Synthetase; Chain A, domain 3
3.30.300.20 Gene3D
3.30.300.20.17
3.30.300.20.17.1
3.30.300.20.17.1.1
3.30.300.20.17.1.1.1
3.30.300.20.17.1.1.1.1

Segment boundaries for domain 2jmpA01

Chopping figure for domain 2jmpA01
DomainStart PDB ResidueStop PDB Residue
2jmpA01 1 87

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


Domain ATOM Sequence

>pdb|2jmpA01
MEQFNAFKSLLKKHYEKTIGFHDKYIKDINRFVFKNNVLLILLENEFARNSLNDNSEIIHLAESLYEGIKSVNFVNEQDF
FFNLAKL    

Domain COMBS Sequence

>pdb|2jmpA01
MGGGGGGMEQFNAFKSLLKKHYEKTIGFHDKYIKDINRFVFKNNVLLILLENEFARNSLNDNSEIIHLAESLYEGIKSVN
FVNEQDFFFNLAKL    

Domain History Events (56)

Domain assigned by cuff on 18 Feb 2008 11:58

same superfamily

Domain assignment manual match h by cuff on 18 Feb 2008 11:57

similar function and structure

Homcheck review by tronnberg on 10 Sep 2007 12:33

SSAP: 75.51 OV: 83 SEQ: 9. Similar linkage and reasonable similar structure. The function for the query is unknown.

Flow stage update by tronnberg on 10 Sep 2007 12:33

SSAP: 75.51 OV: 83 SEQ: 9. Similar linkage and reasonable similar structure. The function for the query is unknown.

Domain assignment manual match t by tronnberg on 10 Sep 2007 12:33

SSAP: 75.51 OV: 83 SEQ: 9. Similar linkage and reasonable similar structure. The function for the query is unknown.

Domain assignment manual match t by tronnberg on 10 Sep 2007 12:33

SSAP: 75.51 OV: 83 SEQ: 9. Similar linkage and reasonable similar structure. The function for the query is unknown.

Homcheck allotment by tronnberg on 10 Sep 2007 12:29

User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by tronnberg on 10 Sep 2007 12:29

User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by auto on 09 Sep 2007 11:53

Domain "2jmpA01" SCOP scan with no results - no SCOP mapping

Domain scan scop cath by auto on 09 Sep 2007 11:52

Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2jmpA01

Flow stage update by auto on 09 Sep 2007 11:43

Retrieved PRC_PFAMCATH results for job ID SID8480868127033140 and results inserted.

Domain scan prc pfamcath by auto on 09 Sep 2007 11:42

Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 0 results for 2jmpA01

Update comment by auto on 09 Sep 2007 08:36

PRC_PFAMCATH job SID8480868127033140 is not yet finished.

Flow stage update by auto on 09 Sep 2007 08:19

The entry "2jmpA01" has been submitted to the PRC_PFAMCATH webservice.

Prc pfamcath submit by auto on 09 Sep 2007 08:19

The entry "2jmpA01" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 09 Sep 2007 07:10

Retrieved SSAP results for job ID SID2663021810993952 and results inserted.

Domain scan ssap cath by auto on 09 Sep 2007 07:04

Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 1439 results for 2jmpA01

Update comment by auto on 05 Sep 2007 19:32

SSAP job SID2663021810993952 is not yet finished.

Ssap cath submit by auto on 05 Sep 2007 16:03

The entry "2jmpA01" has been submitted to the SSAP webservice.

Flow stage update by auto on 05 Sep 2007 16:03

The entry "2jmpA01" has been submitted to the SSAP webservice.

Flow stage update by auto on 05 Sep 2007 08:28

Retrieved PRC results for job ID SID9334605566206592 and inserted them into the database.

Domain scan prc cath by auto on 05 Sep 2007 08:27

Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 1 results for 2jmpA01

Prc cath submit by auto on 05 Sep 2007 03:41

The entry "2jmpA01" has been submitted to the PRC webservice.

Flow stage update by auto on 05 Sep 2007 03:41

The entry "2jmpA01" has been submitted to the PRC webservice.

Flow stage update by auto on 04 Sep 2007 17:12

Retrieved HMM(SAM) results for job ID SID7954953458449392 and inserted them into the database.

Domain scan sam cath by auto on 04 Sep 2007 17:11

Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2jmpA01

Update comment by auto on 04 Sep 2007 11:45

HMM(SAM) job SID7954953458449392 is not yet finished.

Flow stage update by auto on 04 Sep 2007 09:52

The entry "2jmpA01" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 04 Sep 2007 09:52

The entry "2jmpA01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 04 Sep 2007 00:32

Retrieved "2jmpA01" CATHEDRAL results for job ID SID8778256841050304 and inserted them into the database.

Domain scan cathedral cath by auto on 04 Sep 2007 00:30

Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 234 results for 2jmpA01

Flow stage update by auto on 03 Sep 2007 13:59

The entry "2jmpA01" has been submitted to the CATHEDRAL webservice.

Cathedral cath submit by auto on 03 Sep 2007 13:59

The entry "2jmpA01" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 03 Sep 2007 11:57

ScanList with 11099 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2jmpA01.scanlist" for "2jmpA01"

Write scan list by auto on 03 Sep 2007 11:57

Writing ScanList containing 11099 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2jmpA01.scanlist" for domain "2jmpA01"

Update comment by auto on 03 Sep 2007 10:10

Waiting for 18 new domains (example : 2qg4C01) to be processed so that they can be scanned against too.

Update comment by auto on 03 Sep 2007 06:31

Waiting for 73 new domains (example : 2q3eK03) to be processed so that they can be scanned against too.

Update comment by auto on 03 Sep 2007 02:36

Waiting for 140 new domains (example : 2q08A02) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 22:32

Waiting for 188 new domains (example : 2o3jA01) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 18:21

Waiting for 279 new domains (example : 2b43C04) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 14:21

Waiting for 351 new domains (example : 1sh0B02) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 10:14

Waiting for 431 new domains (example : 1r0kA03) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 02:27

Waiting for 551 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 22:11

Waiting for 607 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 18:13

Waiting for 686 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 14:15

Waiting for 771 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 11:40

Waiting for 841 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 06:14

Waiting for 903 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 03:31

Waiting for 969 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 31 Aug 2007 20:05

Waiting for 1085 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Flow stage update by auto on 31 Aug 2007 19:59

No satisfactory AssignClose result found.

Flow stage update by auto on 31 Aug 2007 19:48

No in_process hits for Domain "2jmpA01" ready to be processed

Flow stage update by auto on 31 Aug 2007 19:48

NW result present for Domain "2jmpA01"

Flow stage update by auto on 23 Aug 2007 10:08

All required files are present for Domain "2jmpA01"

Flow stage update by auto on 22 Aug 2007 18:23

Beginning processing for Domain "2jmpA01"

Insertion by cuff on 22 Aug 2007 17:01

nice chopping