CATH Domain: 2iv2X04 XML data for domain: 2iv2X04

Molscript image for 2iv2X04
2iv2X04
PDB coordinates for domain 2iv2X04

PDB 2iv2, Chain X, Domain 4

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.40 Barwin-like endoglucanases
2.40.40.20 Gene3D
2.40.40.20.8
2.40.40.20.8.1
2.40.40.20.8.1.1
2.40.40.20.8.1.1.1
2.40.40.20.8.1.1.1.1

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Segment boundaries for domain 2iv2X04

Chopping figure for domain 2iv2X04
DomainStart PDB ResidueStop PDB Residue
2iv2X01 1 55
2iv2X02 61 137
2iv2X02 336 526
2iv2X03 138 332
2iv2X04 572 688

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 2.40.40.20.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e32A01 83.37 Mus musculusPolyubiquitin bindingProtein complexAggresome assemblyTransitional endoplasmic reticulum ATPase 2.40.40.20 87 8 79 3.44 4.31
1wlfA01 82.03 Mus musculusPeroxisome biogenesis factor 1 2.40.40.20 84 8 78 3.38 4.29
1qcsA01 81.40 Vesicle-fusing ATPaseCricetulus griseusProtein binding 2.40.40.20 81 11 77 3.81 4.90
1cz4A01 81.27 VCP-like ATPaseTransitional endoplasmic reticulum ATPaseThermoplasma acidophilum 2.40.40.20 92 10 80 3.63 4.49
1i50A03 80.45 Pyrimidine metabolismDNA-directed RNA polymerase II subunit A [EC:2.7.7.6]Purine metabolismRNA polymeraseProtein binding 2.40.40.20 101 8 72 3.34 4.62
1kqfA04 79.68 Two-component systemMetabolic pathwaysGlyoxylate and dicarboxylate metabolismMethane metabolismFormate dehydrogenase-N, alpha subunit [EC:1.2.1.2] 2.40.40.20 176 27 54 1.43 2.62
2c45A00 78.45 Beta-Alanine metabolismPantothenate and CoA biosynthesisMetabolic pathwaysAspartate 1-decarboxylase [EC:4.1.1.11]Aspartate 1-decarboxylase 2.40.40.20 113 8 69 3.39 4.91
2vpzA05 77.04 Thermus thermophilus HB27Thiosulfate reductase [EC:1.-.-.-]Thiosulfate reductase 2.40.40.20 159 24 60 2.01 3.33
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2iv2X04
EYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIY
MTYQWWPEYKYCAVRVEPI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2iv2X04
EYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIY
MTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPI
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 27 Aug 2007 14:12

Assigning to "2.40.40.20" based on similarity with "1aa6004"

Flow stage update by auto on 27 Aug 2007 14:04

No in_process hits for Domain "2iv2X04" ready to be processed

Flow stage update by auto on 27 Aug 2007 14:04

NW result present for Domain "2iv2X04"

Flow stage update by auto on 19 Aug 2007 10:12

All required files are present for Domain "2iv2X04"

Flow stage update by auto on 18 Aug 2007 20:23

Beginning processing for Domain "2iv2X04"

Insertion by auto on 18 Aug 2007 18:09

Final ChopClose added based on similarity with "1aa60"