CATH Domain: 2incB00 XML data for domain: 2incB00

Molscript image for 2incB00
2incB00
PDB coordinates for domain 2incB00

PDB 2inc, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.620 Ribonucleotide Reductase, subunit A
1.10.620.20 Ribonucleotide Reductase, subunit A Gene3D
1.10.620.20.3
1.10.620.20.3.1
1.10.620.20.3.1.1
1.10.620.20.3.1.1.1
1.10.620.20.3.1.1.1.1

[top]
Segment boundaries for domain 2incB00

Chopping figure for domain 2incB00
DomainStart PDB ResidueStop PDB Residue
2incB00 8 329

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.620.20.3.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1h0oA00 76.76 Deoxyribonucleotide biosynthetic processProtein bindingRibonucleoside-diphosphate reductase activityPurine metabolismHeavy metal binding (Cu, Fe, Zn) 1.10.620.20 288 5 76 3.58 4.71
2oc5A01 74.99 Prochlorococcus marinus str. MIT 9313Putative uncharacterized protein 1.20.1260.10 203 13 57 2.76 4.83
2rccA01 73.55 Pyrimidine metabolismPurine metabolismRibonucleoside-diphosphate reductase beta chainRibonucleoside-diphosphate reductase subunit betaBacillus halodurans 1.10.620.20 240 8 70 3.36 4.75
[1]
Displaying entries 1 to 3 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2incB00
ALKPLKTWSHLAGNRRRPSEYEVVSTNLHYFTDNPERPWELDSNLPMQTWYKKYCFDSPLKHDDWNAFRDPDQLVYRTYN
LLQDGQESYVQGLFDQLNDRGHDQMLTREWVETLARFYTPARYLFHALQMGSVYIHQIAPASTITNCATYETADHLRWLT
HTAYRTRELANCYPDVGFGKRERDVWENDPAWQGFRELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQLGSLAQSEGD
TLLGLLAQAQKRDAERHRRWSSALVKMALEKEGNREVLQKWVAKWEPLADKAIEAYCSALPDGENAIVEAKSASRYVRQM
MG
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2incB00
ALKPLKTWSHLAGNRRRPSEYEVVSTNLHYFTDNPERPWELDSNLPMQTWYKKYCFDSPLKHDDWNAFRDPDQLVYRTYN
LLQDGQESYVQGLFDQLNDRGHDQMLTREWVETLARFYTPARYLFHALQMGSVYIHQIAPASTITNCATYETADHLRWLT
HTAYRTRELANCYPDVGFGKRERDVWENDPAWQGFRELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQLGSLAQSEGD
TLLGLLAQAQKRDAERHRRWSSALVKMALEKEGNREVLQKWVAKWEPLADKAIEAYCSALPDGENAIVEAKSASRYVRQM
MG
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 11 Jan 2007 23:47

Assigning to "1.10.620.20" based on similarity with "1t0qB00"

Flow stage update by auto on 11 Jan 2007 23:37

No in_process hits for Domain "2incB00" ready to be processed

Flow stage update by auto on 11 Jan 2007 23:37

NW result present for Domain "2incB00"

Flow stage update by auto on 09 Jan 2007 15:38

All required files are present for Domain "2incB00"

Flow stage update by auto on 08 Jan 2007 20:16

Beginning processing for Domain "2incB00"

Insertion by auto on 08 Jan 2007 19:56

Final ChopClose added based on similarity with "1t0qB"