CATH Domain: 2id6A01 XML data for domain: 2id6A01

Molscript image for 2id6A01
2id6A01
PDB coordinates for domain 2id6A01

PDB 2id6, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.60 Homeodomain-like Gene3D
1.10.10.60.23
1.10.10.60.23.1
1.10.10.60.23.1.1
1.10.10.60.23.1.1.1
1.10.10.60.23.1.1.1.1

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Segment boundaries for domain 2id6A01

Chopping figure for domain 2id6A01
DomainStart PDB ResidueStop PDB Residue
2id6A01 -1 46
2id6A02 47 200

Structural Neighbourhood (27 entries)

There are 27 matching structural neighberhood comparisons for CATH ID 1.10.10.60.23.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 27 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1zkgA01 96.99 Thermotoga maritimaTranscriptional regulator, TetR family 1.10.10.60 46 95 97 0.48 0.49
3bqzA01 93.39 HTH-type transcriptional regulator qacRStaphylococcus aureus subsp. aureus Mu50 1.10.10.60 49 39 89 1.16 1.29
2fq4A01 92.82 Transcriptional regulator, TetR familyBacillus cereus ATCC 14579 1.10.10.60 47 34 97 2.33 2.38
1t56A01 92.63 TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN (TETR-FAMILY) ETHRMycobacterium tuberculosis 1.10.10.60 46 23 100 2.52 2.52
2raeA01 91.84 Rhodococcus jostii RHA1Transcriptional regulator, AcrR family protein 1.10.10.60 43 34 93 1.34 1.43
3ccyA01 91.44 Bordetella parapertussisPutative TetR-family transcriptional regulator 1.10.10.60 44 27 95 2.79 2.92
3f0cA01 91.21 Cytophaga hutchinsonii ATCC 33406Transcriptional regulator 1.10.10.60 47 28 91 1.34 1.46
1zk8A01 89.93 Transcriptional regulator, TetR familyBacillus cereus ATCC 14579 1.10.10.60 46 19 95 1.90 1.99
2hyjA01 88.09 Streptomyces coelicolorPutative tetR-family transcriptional regulator 1.10.10.60 46 23 95 2.96 3.09
3c2bA01 87.72 Agrobacterium tumefaciens str. C58Transcriptional regulator, TetR family 1.10.10.60 51 21 86 1.59 1.84
2hxoA01 81.83 Streptomyces coelicolorPutative TetR-family transcriptional regulator 1.10.10.60 63 28 69 2.14 3.06
1ojlA03 81.74 Two-component systemTwo-component system, NtrC family, response regulator HydGTranscriptional regulatory protein zraRSalmonella enterica subsp. enterica serovar Typhimurium 1.10.10.60 47 8 89 3.95 4.42
1gdtB03 80.13 Transposon gamma-delta resolvaseEscherichia coli K-12 1.10.10.60 45 6 86 3.94 4.53
1umqA00 79.94 Rhodobacter sphaeroides 2.4.1Photosynthetic apparatus regulatory protein regA 1.10.10.60 60 6 71 3.37 4.70
1o4xA02 79.67 Sequence-specific DNA binding transcription factor activityPOU domain transcription factor, class 2Negative regulation of transcription, DNA-dependentSequence-specific DNA bindingTranscription repressor activity 1.10.10.60 53 19 83 4.04 4.87
1hcrA00 78.89 Salmonella enterica subsp. enterica serovar TyphimuriumDNA-invertase hin 1.10.10.60 52 10 78 3.68 4.67
1hlvA01 78.28 Centromere protein BMajor centromere autoantigen BHomo sapiensChromosome, centromeric region 1.10.10.60 58 15 68 3.00 4.35
1w1wE00 78.20 Nuclear mitotic cohesin complexProtein acetylationChromatin bindingCohesin complex subunit SCC1Establishment of mitotic sister chromatid cohesion 1.10.10.580 70 4 58 2.56 4.37
1rr7A02 77.23 Middle operon regulatorEnterobacteria phage Mu 1.10.10.60 48 10 83 4.05 4.86
1bl0A01 77.16 Multiple antibiotic resistance protein marAAraC family transcriptional regulator, multiple antibiotic resistance protein MarAEscherichia coli K-12 1.10.10.60 56 2 76 3.22 4.19
1jusD01 72.34 HTH-type transcriptional regulator qacRStaphylococcus aureus 1.10.10.60 49 13 38 0.78 2.01
2pz9A00 68.05 Streptomyces coelicolorPutative regulatory protein 1.10.357.10 177 32 24 0.73 3.00
3bniB00 67.80 Streptomyces coelicolorPutative TetR-family transcriptional regulator 1.10.357.10 171 28 25 1.26 4.90
2q24A00 67.06 Streptomyces coelicolorPutative tetR family transcriptional regulator 1.10.357.10 163 39 25 1.04 4.04
2g3bA00 67.03 Rhodococcus jostii RHA1Possible transcriptional regulator, TetR family protein 1.10.357.10 184 34 24 1.20 4.91
2hkuB00 65.29 Rhodococcus jostii RHA1Possible transcriptional regulator, TetR family protein 1.10.357.10 182 23 23 1.12 4.85
3bjbD00 65.11 Rhodococcus jostii RHA1Probable transcriptional regulator, TetR family protein 1.10.357.10 168 32 24 1.17 4.79
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Displaying entries 1 to 27 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2id6A01
GHLSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2id6A01
GHXLSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKN
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 14 Feb 2008 12:11

Assigning to "1.10.10.60" based on similarity with "1z77A01"

Flow stage update by auto on 14 Feb 2008 12:10

No in_process hits for Domain "2id6A01" ready to be processed

Update comment by auto on 25 Nov 2007 22:27

Domain "2id6A01" hits Domain "2np3B01" (35.4166666666667% over 78.6885245901639%) which is currently in process

Flow stage update by auto on 25 Nov 2007 22:17

Domain "2id6A01" hits Domain "2np3B01" (35.4166666666667% over 78.6885245901639%) which is currently in process

Flow stage update by auto on 25 Nov 2007 22:17

NW result present for Domain "2id6A01"

Flow stage update by auto on 24 Nov 2007 14:37

All required files are present for Domain "2id6A01"

Flow stage update by auto on 23 Nov 2007 14:01

Beginning processing for Domain "2id6A01"

Insertion by auto on 23 Nov 2007 10:15

Final ChopClose added based on similarity with "1z77A"