CATH Domain: 2ibjA00 XML data for domain: 2ibjA00

Molscript image for 2ibjA00
2ibjA00
PDB coordinates for domain 2ibjA00

PDB 2ibj, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.120 Flavocytochrome B2; Chain A, domain 1
3.10.120.10 Flavocytochrome B2, subunit A, domain 1 Gene3D
3.10.120.10.3
3.10.120.10.3.1
3.10.120.10.3.1.1
3.10.120.10.3.1.1.1
3.10.120.10.3.1.1.1.1

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Segment boundaries for domain 2ibjA00

Chopping figure for domain 2ibjA00
DomainStart PDB ResidueStop PDB Residue
2ibjA00 1 86

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.10.120.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cxyA00 92.88 Ectothiorhodospira shaposhnikoviiSoluble cytochrome b558 3.10.120.10 81 32 89 1.16 1.30
1x3xA00 90.15 Ascaris suumCytochrome b5 3.10.120.10 82 34 90 1.76 1.94
3ks0A00 87.91 L-lactate dehydrogenase (cytochrome) activityL-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]Pyruvate metabolismLactate metabolic processMetabolic pathways 3.10.120.10 92 36 91 3.02 3.31
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ibjA00
SEDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELV
AEERSN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ibjA00
MSSEDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGE
LVAEERSN
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Jul 2007 07:00

Assigning to "3.10.120.10" based on similarity with "1b5m000"

Flow stage update by auto on 29 Jul 2007 06:55

No in_process hits for Domain "2ibjA00" ready to be processed

Flow stage update by auto on 29 Jul 2007 06:55

NW result present for Domain "2ibjA00"

Flow stage update by auto on 14 Jul 2007 06:02

All required files are present for Domain "2ibjA00"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2ibjA00"

Insertion by auto on 13 Jul 2007 12:32

Final ChopClose added based on similarity with "1b5m0"