CATH Domain: 2i7cB02 XML data for domain: 2i7cB02

Molscript image for 2i7cB02
2i7cB02
PDB coordinates for domain 2i7cB02

PDB 2i7c, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.150 Vaccinia Virus protein VP39 Gene3D
3.40.50.150.8
3.40.50.150.8.1
3.40.50.150.8.1.1
3.40.50.150.8.1.1.1
3.40.50.150.8.1.1.1.1

Segment boundaries for domain 2i7cB02

Chopping figure for domain 2i7cB02
DomainStart PDB ResidueStop PDB Residue
2i7cB01 2 58
2i7cB02 59 281

Structural Neighbourhood (19 entries)

There are 19 matching structural neighberhood comparisons for CATH ID 3.40.50.150.8.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 19 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mjfA02 90.01 Pyrococcus furiosusArginine and proline metabolismProbable spermidine synthaseCysteine and methionine metabolismSpermidine synthase [EC:2.5.1.16] 3.40.50.150 219 32 94 1.54 1.63
1uirA02 86.95 Arginine and proline metabolismGlutathione metabolismMetabolic pathwaysCysteine and methionine metabolismBeta-Alanine metabolism 3.40.50.150 253 29 86 1.90 2.21
3c6kB03 83.67 Spermine synthaseArginine and proline metabolismSpermine synthase [EC:2.5.1.22]Glutathione metabolismMetabolic pathways 3.40.50.150 187 20 80 3.29 4.08
2r3sA03 78.61 3.40.50.150 202 11 72 3.26 4.47
1l3iA00 78.15 Methanothermobacter thermautotrophicus str. Delta HPorphyrin and chlorophyll metabolismProbable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]Precorrin-8W decarboxylase [EC:1.-.-.-]Metabolic pathways 3.40.50.150 178 15 68 2.87 4.16
2qy6A01 77.81 Escherichia coli O157:H7TRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC 3.40.50.150 234 7 70 2.83 4.04
3bxoA01 77.39 Streptomyces venezuelaeN,N-dimethyltransferase 3.40.50.150 177 11 71 3.31 4.62
2b3tA02 77.29 Methyltransferase [EC:2.1.1.-]Protein methyltransferase hemKProtein bindingEscherichia coli K-12 3.40.50.150 192 10 73 3.36 4.55
1m6yA01 77.00 Thermotoga maritimaS-adenosyl-methyltransferase [EC:2.1.1.-]S-adenosyl-L-methionine-dependent methyltransferase mraW 3.40.50.150 180 13 72 3.60 4.93
1dusA00 76.97 Methanocaldococcus jannaschiiProtein MJ0882 3.40.50.150 192 17 70 3.43 4.85
1ej0A00 76.44 Ribosomal RNA large subunit methyltransferase ERRNA (uridine-2'-O-)-methyltransferase activityEnzyme-directed rRNA 2'-O-methylationRibosomal RNA large subunit methyltransferase E [EC:2.1.1.-]Escherichia coli K-12 3.40.50.150 180 12 71 3.58 5.00
1ne2B00 76.39 Putative uncharacterized protein Ta1320Putative methylaseThermoplasma acidophilum 3.40.50.150 180 11 69 3.47 4.97
1g8aA02 76.20 Pyrococcus horikoshiiFibrillarin-like rRNA/tRNA 2'-O-methyltransferaseFibrillarin-like pre-rRNA processing protein 3.40.50.150 176 17 73 3.63 4.91
3ftdA01 76.16 Dimethyladenosine transferase [EC:2.1.1.-]Ribosomal RNA small subunit methyltransferase AAquifex aeolicus 3.40.50.150 177 15 70 3.30 4.70
2py6A03 75.34 Methylobacillus flagellatus KTMethyltransferase FkbM 3.40.50.150 177 9 67 3.15 4.66
1sqgA04 75.08 Ribosomal RNA small subunit methyltransferase B [EC:2.1.1.-]Ribosomal RNA small subunit methyltransferase BRRNA (cytosine-C5-)-methyltransferase activityRRNA base methylationEscherichia coli K-12 3.40.50.150 198 11 75 3.69 4.91
1qamA01 75.05 Bacillus subtilisRRNA (adenine-N6-)-methyltransferase [EC:2.1.1.48]RRNA adenine N-6-methyltransferase 3.40.50.150 157 12 66 3.00 4.53
2fhpA00 74.61 Methylase, putativeEnterococcus faecalis 3.40.50.150 177 14 67 3.28 4.85
3frhA02 73.52 16S rRNA methylaseEscherichia coli 3.40.50.150 183 8 65 3.15 4.79
Displaying entries 1 to 19 (page 1 of 1)


Domain ATOM Sequence

>pdb|2i7cB02
DEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE
DASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYA
NISIPTYPCGCIGILCCSKTDTGLTKPNKKLESKEFADLKYYNYENHSAAFKLPAFLLKEIEN    

Domain COMBS Sequence

>pdb|2i7cB02
DEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE
DASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYA
NISIPTYPCGCIGILCCSKTDTGLTKPNKKLESKEFADLKYYNYENHSAAFKLPAFLLKEIENI    

Domain History Events (10)

Domain assigned by auto on 28 Jun 2007 10:02

Assigning to "3.40.50.150" based on similarity with "2hteA02"

Flow stage update by auto on 28 Jun 2007 10:01

No in_process hits for Domain "2i7cB02" ready to be processed

Update comment by auto on 28 Jun 2007 06:05

Domain "2i7cB02" hits Domain "2i7cC02" (100% over 100%) which is currently in process

Update comment by auto on 28 Jun 2007 02:05

Domain "2i7cB02" hits Domain "2hteA02" (100% over 100%) which is currently in process

Update comment by auto on 27 Jun 2007 22:03

Domain "2i7cB02" hits Domain "2hteC02" (100% over 100%) which is currently in process

Flow stage update by auto on 01 Apr 2007 21:59

Domain "2i7cB02" hits Domain "2hteC02" (100% over 100%) which is currently in process

Flow stage update by auto on 01 Apr 2007 21:59

NW result present for Domain "2i7cB02"

Flow stage update by auto on 31 Mar 2007 21:59

All required files are present for Domain "2i7cB02"

Flow stage update by auto on 31 Mar 2007 06:02

Beginning processing for Domain "2i7cB02"

Insertion by auto on 31 Mar 2007 05:57

Final ChopClose added based on similarity with "2hteA"