CATH Domain: 2i5iA00 XML data for domain: 2i5iA00

Molscript image for 2i5iA00
2i5iA00
PDB coordinates for domain 2i5iA00

PDB 2i5i, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.370 Glycoside hydrolase/deacetylase Gene3D
3.20.20.370.1
3.20.20.370.1.1
3.20.20.370.1.1.1
3.20.20.370.1.1.1.1
3.20.20.370.1.1.1.1.1

[top]
Segment boundaries for domain 2i5iA00

Chopping figure for domain 2i5iA00
DomainStart PDB ResidueStop PDB Residue
2i5iA00 2 261

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.20.20.370.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2nlyA00 77.86 Hypothetical proteinBH1492 proteinBacillus halodurans 3.20.20.370 216 13 80 3.14 3.89
2qv5A01 75.58 Hypothetical proteinAgrobacterium tumefaciens str. C58Putative uncharacterized protein 3.20.20.370 230 6 80 3.56 4.43
[1]
Displaying entries 1 to 2 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2i5iA00
SNKKLIINADDFGYTPAVTQGIIEAHKRGVVTSTTALPTSPYFLEAESARISAPTLAIGVHLTLTLNQAKPILPREVPSL
VDEAGYFWHQSIFEEKVNLEEVYNEWDAQIISFKSGRRPDHIDSHHNVHGKNKKLLGVALALARKYQLPLRNASRSIETK
DYLELYQDVRTPDELYQFYDKAISTETILQLLDVVCSEGEVFEINCHPAFIDTILQNQSGYCPRIREVEILTSQEVKEAI
EERGILLANYESLA
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2i5iA00
GXSNKKLIINADDFGYTPAVTQGIIEAHKRGVVTSTTALPTSPYFLEAXESARISAPTLAIGVHLTLTLNQAKPILPREX
VPSLVDEAGYFWHQSIFEEKVNLEEVYNEWDAQIISFXKSGRRPDHIDSHHNVHGKNKKLLGVALALARKYQLPLRNASR
SIETKDYLELYQDVRTPDEXLYQFYDKAISTETILQLLDXVVCSEGEVFEINCHPAFIDTILQNQSGYCXPRIREVEILT
SQEVKEAIEERGILLANYESLAX
BLAST against CATH

[top]
Domain History Events (10)

Domain assigned by auto on 10 Apr 2008 14:24

Assigning to "3.20.20.370" based on similarity with "2i5iB00"

Flow stage update by auto on 10 Apr 2008 14:09

No in_process hits for Domain "2i5iA00" ready to be processed

Update comment by auto on 03 Sep 2007 20:09

Domain "2i5iA00" hits Domain "2i5iB00" (96.958174904943% over 100%) which is currently in process

Update comment by auto on 03 Sep 2007 11:16

Domain "2i5iA00" hits Domain "2i5iB00" (96.958174904943% over 100%) which is currently in process

Update comment by auto on 27 Aug 2007 06:13

Domain "2i5iA00" hits Domain "2i5iB00" (96.958174904943% over 100%) which is currently in process

Flow stage update by auto on 27 Aug 2007 06:12

Domain "2i5iA00" hits Domain "2i5iB00" (96.958174904943% over 100%) which is currently in process

Flow stage update by auto on 27 Aug 2007 06:12

NW result present for Domain "2i5iA00"

Flow stage update by auto on 19 Aug 2007 10:12

All required files are present for Domain "2i5iA00"

Flow stage update by auto on 18 Aug 2007 14:31

Beginning processing for Domain "2i5iA00"

Insertion by auto on 18 Aug 2007 14:04

Final ChopClose added based on similarity with "2i5iB"