CATH Domain: 2i2oA00 XML data for domain: 2i2oA00

Molscript image for 2i2oA00
2i2oA00
PDB coordinates for domain 2i2oA00

PDB 2i2o, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.40 Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
1.25.40.180 Gene3D
1.25.40.180.2
1.25.40.180.2.1
1.25.40.180.2.1.1
1.25.40.180.2.1.1.1
1.25.40.180.2.1.1.1.1

Segment boundaries for domain 2i2oA00

Chopping figure for domain 2i2oA00
DomainStart PDB ResidueStop PDB Residue
2i2oA00 7 217

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


Domain ATOM Sequence

>pdb|2i2oA00
EDYKIQSFDLETQKLLKTALKDPGSVDLEKVSSVIVDQSLKDQVFSREAGRICYTIVQAEAKQTNGSVFRRNLLNRLQQE
FKAREETRKRSTQEWVCLVSFICNIFDYLKVNNPVALVHPVYDCLFRLAQSDALKNEEEVDCLVLQLHRIGDQLEKNVQL
DELFNLLRDGFLLQEDLSSGRLLLLEILEFRAGGWKLSDTAQKYYY    

Domain COMBS Sequence

>pdb|2i2oA00
AIAENSSKEDYKIQSFDLETQKLLKTALKDPGSVDLEKVSSVIVDQSLKDQVFSREAGRICYTIVQAEAKQTNGSVFRRN
LLNRLQQEFKAREETRKRSTQEWVCLVSFICNIFDYLKVNNXPXVALVHPVYDCLFRLAQSDALKNEEEVDCLVLQLHRI
GDQLEKXNVQLXDELFNLLRDGFLLQEDLSSXGRLLLLEILEFRAGGWKLSDTAQKYYYSEVTD    

Domain History Events (50)

Domain assigned by cuff on 12 Feb 2008 15:06

i agree. same superfamily

Domain assignment manual match h by rupa on 10 Sep 2007 10:05

Very high ssap score, same fold, and same pfam class.

Homcheck review by rupa on 10 Sep 2007 10:05

Very high ssap score, same fold, and same pfam class.

Flow stage update by rupa on 10 Sep 2007 10:05

Very high ssap score, same fold, and same pfam class.

Homcheck allotment by rupa on 10 Sep 2007 10:03

User 'rupa' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by rupa on 10 Sep 2007 10:03

User 'rupa' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by auto on 08 Sep 2007 11:30

Domain "2i2oA00" SCOP scan with no results - no SCOP mapping

Domain scan scop cath by auto on 08 Sep 2007 11:30

Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2i2oA00

Flow stage update by auto on 08 Sep 2007 11:18

Retrieved PRC_PFAMCATH results for job ID SID8877072429595896 and results inserted.

Domain scan prc pfamcath by auto on 08 Sep 2007 11:17

Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 4 results for 2i2oA00

Update comment by auto on 08 Sep 2007 07:50

PRC_PFAMCATH job SID8877072429595896 is not yet finished.

Prc pfamcath submit by auto on 08 Sep 2007 07:48

The entry "2i2oA00" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 08 Sep 2007 07:48

The entry "2i2oA00" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 08 Sep 2007 06:31

Retrieved SSAP results for job ID SID4595878571186704 and results inserted.

Domain scan ssap cath by auto on 08 Sep 2007 06:30

Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 474 results for 2i2oA00

Update comment by auto on 05 Sep 2007 19:21

SSAP job SID4595878571186704 is not yet finished.

Ssap cath submit by auto on 05 Sep 2007 15:48

The entry "2i2oA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 05 Sep 2007 15:48

The entry "2i2oA00" has been submitted to the SSAP webservice.

Flow stage update by auto on 05 Sep 2007 06:40

Retrieved PRC results for job ID SID0860291843497936 and inserted them into the database.

Domain scan prc cath by auto on 05 Sep 2007 06:39

Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 3 results for 2i2oA00

Prc cath submit by auto on 04 Sep 2007 13:45

The entry "2i2oA00" has been submitted to the PRC webservice.

Flow stage update by auto on 04 Sep 2007 13:45

The entry "2i2oA00" has been submitted to the PRC webservice.

Flow stage update by auto on 04 Sep 2007 11:34

Retrieved HMM(SAM) results for job ID SID7199083551783840 and inserted them into the database.

Domain scan sam cath by auto on 04 Sep 2007 11:33

Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 2 results for 2i2oA00

Flow stage update by auto on 04 Sep 2007 09:39

The entry "2i2oA00" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 04 Sep 2007 09:39

The entry "2i2oA00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 03 Sep 2007 22:18

Retrieved "2i2oA00" CATHEDRAL results for job ID SID0303533973450864 and inserted them into the database.

Domain scan cathedral cath by auto on 03 Sep 2007 22:17

Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 76 results for 2i2oA00

Cathedral cath submit by auto on 03 Sep 2007 13:46

The entry "2i2oA00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 03 Sep 2007 13:46

The entry "2i2oA00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 03 Sep 2007 11:42

ScanList with 11099 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2i2oA00.scanlist" for "2i2oA00"

Write scan list by auto on 03 Sep 2007 11:41

Writing ScanList containing 11099 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2i2oA00.scanlist" for domain "2i2oA00"

Update comment by auto on 03 Sep 2007 10:10

Waiting for 18 new domains (example : 2qg4C01) to be processed so that they can be scanned against too.

Update comment by auto on 03 Sep 2007 06:30

Waiting for 73 new domains (example : 2q3eK03) to be processed so that they can be scanned against too.

Update comment by auto on 03 Sep 2007 02:35

Waiting for 140 new domains (example : 2q08A02) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 22:31

Waiting for 188 new domains (example : 2o3jA01) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 18:20

Waiting for 279 new domains (example : 2b43C04) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 14:20

Waiting for 351 new domains (example : 1sh0B02) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 10:14

Waiting for 431 new domains (example : 1r0kA03) to be processed so that they can be scanned against too.

Update comment by auto on 02 Sep 2007 02:26

Waiting for 551 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 22:11

Waiting for 607 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 18:13

Waiting for 686 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 14:14

Waiting for 771 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Sep 2007 11:39

Waiting for 841 new domains (example : 1bplB01) to be processed so that they can be scanned against too.

Flow stage update by auto on 01 Sep 2007 10:27

No satisfactory AssignClose result found.

Flow stage update by auto on 01 Sep 2007 10:10

No in_process hits for Domain "2i2oA00" ready to be processed

Flow stage update by auto on 01 Sep 2007 10:10

NW result present for Domain "2i2oA00"

Flow stage update by auto on 30 Aug 2007 10:04

All required files are present for Domain "2i2oA00"

Flow stage update by auto on 29 Aug 2007 14:34

Beginning processing for Domain "2i2oA00"

Insertion by cuff on 29 Aug 2007 11:00

nice chopping