CATH Domain: 2hueC00 XML data for domain: 2hueC00

Molscript image for 2hueC00
2hueC00
PDB coordinates for domain 2hueC00

PDB 2hue, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.20 Histone, subunit A
1.10.20.10 Histone, subunit A Gene3D
1.10.20.10.6
1.10.20.10.6.1
1.10.20.10.6.1.1
1.10.20.10.6.1.1.1
1.10.20.10.6.1.1.1.1

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Segment boundaries for domain 2hueC00

Chopping figure for domain 2hueC00
DomainStart PDB ResidueStop PDB Residue
2hueC00 20 101

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 1.10.20.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1b67A00 87.53 Methanothermus fervidusDNA-binding protein HMf-1 1.10.20.10 68 27 82 1.46 1.76
1tafA00 86.67 Transcription factor TFIID complexSAGA complexTranscription initiation factor TFIID subunit D7Transcription initiation factor TFIID subunit 9Drosophila melanogaster 1.10.20.10 67 17 81 1.93 2.36
1h3oB00 86.19 General RNA polymerase II transcription factor activityTranscription initiation factor TFIID subunit 12STAGA complexHistone H3 acetylationPlasma membrane 1.10.20.10 71 23 85 2.69 3.15
1tafB00 85.71 Transcription initiation factor TFIID subunit D5Transcription factor TFIID complexTranscription initiation factor TFIID subunit 6Drosophila melanogasterProtein binding 1.10.20.10 69 23 84 2.27 2.70
1jfiA00 84.29 Sequence-specific DNA binding transcription factor activityTranscription corepressor activityHomo sapiensNegative regulation of transcription from RNA polymerase II promoterDr1-associated corepressor 1.10.20.10 63 14 75 1.62 2.14
2hueB00 77.98 Systemic lupus erythematosusHistone H3.2Xenopus laevisHistone H3 1.10.20.10 75 12 75 3.46 4.58
1h3oA00 77.31 General RNA polymerase II transcription factor activityTranscription coactivator activityBasal transcription factorsTranscription factor TFIID complexCytoplasm 1.10.20.10 48 8 56 2.36 4.21
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2hueC00
KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYG
FG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2hueC00
MKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY
GFGG
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 16 Dec 2006 15:36

Assigning to "1.10.20.10" based on similarity with "1hq3D00"

Flow stage update by auto on 16 Dec 2006 15:29

No in_process hits for Domain "2hueC00" ready to be processed

Flow stage update by auto on 16 Dec 2006 15:29

NW result present for Domain "2hueC00"

Flow stage update by auto on 13 Dec 2006 19:36

All required files are present for Domain "2hueC00"

Flow stage update by auto on 13 Dec 2006 02:34

Beginning processing for Domain "2hueC00"

Insertion by auto on 13 Dec 2006 00:10

Final ChopClose added based on similarity with "1hq3D"