CATH Domain: 2hqsA02 XML data for domain: 2hqsA02

Molscript image for 2hqsA02
2hqsA02
PDB coordinates for domain 2hqsA02

PDB 2hqs, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.30 TolB, C-terminal domain Gene3D
2.120.10.30.4
2.120.10.30.4.1
2.120.10.30.4.1.1
2.120.10.30.4.1.1.1
2.120.10.30.4.1.1.1.1

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Segment boundaries for domain 2hqsA02

Chopping figure for domain 2hqsA02
DomainStart PDB ResidueStop PDB Residue
2hqsA01 24 165
2hqsA02 166 438

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.120.10.30.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ojhA00 81.85 Agrobacterium tumefaciens str. C58Uncharacterized protein Atu1656 2.120.10.30 264 21 90 3.54 3.91
1npeA00 80.81 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 9 93 3.00 3.21
1ijqA01 80.36 Low-density lipoprotein particle clearanceIntestinal cholesterol absorptionVery-low-density lipoprotein receptor activityProtein O-linked glycosylationLow-density lipoprotein receptor 2.120.10.30 254 9 91 3.04 3.33
1rwiA00 78.44 Serine/threonine protein kinase, bacterial [EC:2.7.11.1]Serine/threonine-protein kinase pknDMycobacterium tuberculosis 2.120.10.30 256 9 82 3.35 4.05
1k32A01 77.39 Tricorn proteaseTricorn protease [EC:3.4.21.-]Thermoplasma acidophilum 2.120.10.60 272 12 84 3.54 4.19
1ofzA00 71.64 Fucose-specific lectinAleuria aurantia 2.120.10.70 312 6 75 3.77 4.98
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2hqsA02
TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR
HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP
QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLV
STDGRFKARLPATDGQVKFPAWSPYLHHHH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2hqsA02
TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR
HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP
QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLV
STDGRFKARLPATDGQVKFPAWSPYLHHHHHH
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Jul 2007 10:38

Assigning to "2.120.10.30" based on similarity with "2ivzC02"

Flow stage update by auto on 28 Jul 2007 10:34

No in_process hits for Domain "2hqsA02" ready to be processed

Flow stage update by auto on 28 Jul 2007 10:34

NW result present for Domain "2hqsA02"

Flow stage update by auto on 14 Jul 2007 06:02

All required files are present for Domain "2hqsA02"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2hqsA02"

Insertion by auto on 13 Jul 2007 08:59

Final ChopClose added based on similarity with "1crzA"