CATH Domain: 2hpvA00 XML data for domain: 2hpvA00

Molscript image for 2hpvA00
2hpvA00
PDB coordinates for domain 2hpvA00

PDB 2hpv, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.360 Gene3D
3.40.50.360.13
3.40.50.360.13.1
3.40.50.360.13.1.1
3.40.50.360.13.1.1.1
3.40.50.360.13.1.1.1.1

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Segment boundaries for domain 2hpvA00

Chopping figure for domain 2hpvA00
DomainStart PDB ResidueStop PDB Residue
2hpvA00 2 208

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.360.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e5dA01 79.98 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.40.50.360 143 11 66 2.68 4.02
2ohhA02 79.68 Type A flavoprotein fprAMethanothermobacter marburgensis str. Marburg 3.40.50.360 144 12 68 2.93 4.27
5nulA00 76.65 Clostridium beijerinckiiFlavodoxin 3.40.50.360 138 15 64 2.99 4.66
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2hpvA00
SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNPEIDEELLSAWGALRAGAAFETLSENQQQKV
ARFNELTDQFLSADKVVIANPWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYI
KAILNFIGVDQVDGLFIEGIDHFPDRAEELLNTATKATEYGKTF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2hpvA00
XSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNXPEIDEELLSAWGALRAGAAFETLSENQQQ
KVARFNELTDQFLSADKVVIANPXWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFAS
QYIKAILNFIGVDQVDGLFIEGIDHFPDRAEELLNTAXTKATEYGKTF
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 03 Jul 2007 06:04

Assigning to "3.40.50.360" based on similarity with "2hpvC00"

Flow stage update by auto on 03 Jul 2007 06:04

No in_process hits for Domain "2hpvA00" ready to be processed

Update comment by auto on 03 Jul 2007 02:08

Domain "2hpvA00" hits Domain "2hpvB00" (98.0769230769231% over 100%) which is currently in process

Flow stage update by auto on 03 Jul 2007 02:06

Domain "2hpvA00" hits Domain "2hpvB00" (98.0769230769231% over 100%) which is currently in process

Flow stage update by auto on 03 Jul 2007 02:06

NW result present for Domain "2hpvA00"

Flow stage update by auto on 28 Jun 2007 22:00

All required files are present for Domain "2hpvA00"

Flow stage update by auto on 27 Jun 2007 18:22

Beginning processing for Domain "2hpvA00"

Insertion by auto on 27 Jun 2007 18:15

Final ChopClose added based on similarity with "2hpvC"