Domain assigned by cuff on 14 Apr 2008 10:51
same fold but no functional evidence to suggest homology
CATH Domain: 2hmaA02
2hmaA02
PDB 2hma, Chain A, Domain 2
Segment boundaries for domain 2hmaA02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 2hmaA01 | 2 | 213 |
| 2hmaA02 | 214 | 282 |
| 2hmaA03 | 283 | 373 |
Structural Neighbourhood (1 entries)
There are 1 matching structural neighberhood comparisons for CATH ID 2.30.30.280.1.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 1 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
 |
1sf9A02 | 73.89 | 2.30.30.340 | 54 | 3 | 67 | 3.36 | 5.00 |
[1]
Displaying entries 1 to 1 (page 1 of 1)
Domain History Events (222)
Domain assignment manual match t by tronnberg on 15 Nov 2007 09:45
SSAP:76.5 OV: 67 SEQ: 8. I am not sure but I think that the query should be assigned to the same topology as the chosen match.
Homcheck review by tronnberg on 15 Nov 2007 09:45
SSAP:76.5 OV: 67 SEQ: 8. I am not sure but I think that the query should be assigned to the same topology as the chosen match.
Flow stage update by tronnberg on 15 Nov 2007 09:45
SSAP:76.5 OV: 67 SEQ: 8. I am not sure but I think that the query should be assigned to the same topology as the chosen match.
Homcheck comment by tronnberg on 30 Aug 2007 10:47
Not sure, I will come back to this on later.
Homcheck allotment by tronnberg on 29 Aug 2007 09:11
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by tronnberg on 29 Aug 2007 09:11
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by auto on 28 Aug 2007 23:21
Domain "2hmaA02" SCOP scan with no results - no SCOP mapping
Domain scan scop cath by auto on 28 Aug 2007 23:19
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2hmaA02
Flow stage update by auto on 28 Aug 2007 23:16
Retrieved PRC_PFAMCATH results for job ID SID3453721629936336 and results inserted.
Domain scan prc pfamcath by auto on 28 Aug 2007 23:15
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 14 results for 2hmaA02
Update comment by auto on 28 Aug 2007 19:16
PRC_PFAMCATH job SID3453721629936336 is not yet finished.
Flow stage update by auto on 28 Aug 2007 19:15
The entry "2hmaA02" has been submitted to the PRC_PFAMCATH webservice.
Prc pfamcath submit by auto on 28 Aug 2007 19:15
The entry "2hmaA02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 28 Aug 2007 18:38
Retrieved SSAP results for job ID SID1706101068703935 and results inserted.
Domain scan ssap cath by auto on 28 Aug 2007 18:36
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 1012 results for 2hmaA02
Update comment by auto on 28 Aug 2007 14:59
SSAP job SID1706101068703935 is not yet finished.
Ssap cath submit by auto on 28 Aug 2007 14:50
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 28 Aug 2007 14:50
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 28 Aug 2007 10:16
Giving up on SSAP job SID5366905786043328 because submission time of Sun Aug 26 09:09:39 2007 is more than 172800 seconds older than current time (Tue Aug 28 10:16:15 2007).
Update comment by auto on 26 Aug 2007 09:18
SSAP job SID5366905786043328 is not yet finished.
Ssap cath submit by auto on 26 Aug 2007 09:09
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 26 Aug 2007 09:09
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 26 Aug 2007 02:54
Giving up on SSAP job SID6499972386188656 because submission time of Thu Aug 23 22:31:50 2007 is more than 172800 seconds older than current time (Sun Aug 26 02:54:03 2007).
Update comment by auto on 23 Aug 2007 22:43
SSAP job SID6499972386188656 is not yet finished.
Ssap cath submit by auto on 23 Aug 2007 22:31
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 23 Aug 2007 22:31
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 23 Aug 2007 19:34
Giving up on SSAP job SID8527545693898944 because submission time of Tue Aug 21 10:52:29 2007 is more than 172800 seconds older than current time (Thu Aug 23 19:34:12 2007).
Update comment by auto on 21 Aug 2007 11:34
SSAP job SID8527545693898944 is not yet finished.
Ssap cath submit by auto on 21 Aug 2007 10:52
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 21 Aug 2007 10:52
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 21 Aug 2007 08:13
Giving up on SSAP job SID6913429578268676 because submission time of Sun Aug 19 07:30:31 2007 is more than 172800 seconds older than current time (Tue Aug 21 08:13:36 2007).
Update comment by auto on 19 Aug 2007 08:24
SSAP job SID6913429578268676 is not yet finished.
Flow stage update by auto on 19 Aug 2007 07:30
The entry "2hmaA02" has been submitted to the SSAP webservice.
Ssap cath submit by auto on 19 Aug 2007 07:30
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 19 Aug 2007 03:31
Giving up on SSAP job SID3278083579086064 because submission time of Thu Aug 16 23:23:11 2007 is more than 172800 seconds older than current time (Sun Aug 19 03:31:51 2007).
Update comment by auto on 17 Aug 2007 00:32
SSAP job SID3278083579086064 is not yet finished.
Ssap cath submit by auto on 16 Aug 2007 23:23
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 16 Aug 2007 23:23
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 16 Aug 2007 18:30
Giving up on SSAP job SID0820215239956208 because submission time of Tue Aug 14 08:57:20 2007 is more than 172800 seconds older than current time (Thu Aug 16 18:30:55 2007).
Update comment by auto on 14 Aug 2007 10:30
SSAP job SID0820215239956208 is not yet finished.
Ssap cath submit by auto on 14 Aug 2007 08:57
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 14 Aug 2007 08:57
The entry "2hmaA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 14 Aug 2007 05:45
Retrieved PRC results for job ID SID5759866080044552 and inserted them into the database.
Domain scan prc cath by auto on 14 Aug 2007 05:44
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 1 results for 2hmaA02
Prc cath submit by auto on 13 Aug 2007 10:23
The entry "2hmaA02" has been submitted to the PRC webservice.
Flow stage update by auto on 13 Aug 2007 10:23
The entry "2hmaA02" has been submitted to the PRC webservice.
Flow stage update by auto on 13 Aug 2007 07:12
Retrieved HMM(SAM) results for job ID SID7765346651388748 and inserted them into the database.
Domain scan sam cath by auto on 13 Aug 2007 07:11
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2hmaA02
Update comment by auto on 12 Aug 2007 13:02
HMM(SAM) job SID7765346651388748 is not yet finished.
Sam cath submit by auto on 12 Aug 2007 11:45
The entry "2hmaA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 12 Aug 2007 11:45
The entry "2hmaA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 12 Aug 2007 02:48
Retrieved "2hmaA02" CATHEDRAL results for job ID SID2999103931224688 and inserted them into the database.
Domain scan cathedral cath by auto on 12 Aug 2007 02:47
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 86 results for 2hmaA02
Update comment by auto on 11 Aug 2007 05:48
"2hmaA02" CATHEDRAL job SID2999103931224688 is not yet finished.
Flow stage update by auto on 11 Aug 2007 04:12
The entry "2hmaA02" has been submitted to the CATHEDRAL webservice.
Cathedral cath submit by auto on 11 Aug 2007 04:12
The entry "2hmaA02" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 11 Aug 2007 02:09
ScanList with 9778 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2hmaA02.scanlist" for "2hmaA02"
Write scan list by auto on 11 Aug 2007 02:09
Writing ScanList containing 9778 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2hmaA02.scanlist" for domain "2hmaA02"
Update comment by auto on 10 Aug 2007 14:32
Waiting for 984 new domains (example : 1h4uA00) to be processed so that they can be scanned against too.
Update comment by auto on 10 Aug 2007 10:31
Waiting for 1052 new domains (example : 1h4uA00) to be processed so that they can be scanned against too.
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Waiting for 1095 new domains (example : 1h4uA00) to be processed so that they can be scanned against too.
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Waiting for 1146 new domains (example : 1h4uA00) to be processed so that they can be scanned against too.
Update comment by auto on 09 Aug 2007 22:32
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Update comment by auto on 09 Aug 2007 19:12
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Update comment by auto on 09 Aug 2007 14:57
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Update comment by auto on 09 Aug 2007 06:43
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Update comment by auto on 09 Aug 2007 02:50
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Update comment by auto on 08 Aug 2007 22:33
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Update comment by auto on 08 Aug 2007 18:41
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Update comment by auto on 08 Aug 2007 06:49
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Update comment by auto on 07 Aug 2007 22:44
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Waiting for 2348 new domains (example : 1rqrB02) to be processed so that they can be scanned against too.
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Waiting for 2404 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 05 Aug 2007 19:03
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Update comment by auto on 05 Aug 2007 07:19
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Update comment by auto on 05 Aug 2007 03:11
Waiting for 2883 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 04 Aug 2007 22:49
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Waiting for 2965 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 04 Aug 2007 15:07
Waiting for 3034 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 04 Aug 2007 11:07
Waiting for 3098 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 04 Aug 2007 06:58
Waiting for 3152 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Waiting for 3197 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 03 Aug 2007 22:54
Waiting for 3216 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 03 Aug 2007 19:51
Waiting for 3206 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 03 Aug 2007 15:47
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Update comment by auto on 03 Aug 2007 10:58
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Update comment by auto on 03 Aug 2007 07:00
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Update comment by auto on 03 Aug 2007 02:59
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Update comment by auto on 02 Aug 2007 22:45
Waiting for 3254 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 19:28
Waiting for 3282 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 15:21
Waiting for 3339 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 11:02
Waiting for 3395 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 07:02
Waiting for 3471 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 03:01
Waiting for 3542 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Aug 2007 22:42
Waiting for 3606 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Aug 2007 19:31
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Update comment by auto on 01 Aug 2007 15:03
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Update comment by auto on 01 Aug 2007 10:54
Waiting for 3800 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Aug 2007 06:55
Waiting for 3884 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Aug 2007 03:00
Waiting for 3939 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 22:41
Waiting for 3997 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 18:59
Waiting for 4076 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 14:50
Waiting for 4166 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 11:08
Waiting for 4233 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 07:24
Waiting for 4307 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 03:28
Waiting for 4386 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 23:30
Waiting for 4468 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 19:52
Waiting for 4553 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 16:26
Waiting for 4605 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 10:03
Waiting for 4715 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 02:30
Waiting for 4857 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Jul 2007 11:33
Waiting for 4966 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 29 Jul 2007 00:41
Waiting for 5134 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Jul 2007 19:14
Waiting for 5205 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Jul 2007 15:08
Waiting for 5292 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 27 Jul 2007 22:49
Waiting for 5546 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 27 Jul 2007 15:01
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Waiting for 5804 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 26 Jul 2007 19:40
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Update comment by auto on 26 Jul 2007 16:02
Waiting for 6103 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Waiting for 6154 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Waiting for 6282 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 25 Jul 2007 15:36
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Update comment by auto on 25 Jul 2007 11:19
Waiting for 6496 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 24 Jul 2007 11:21
Waiting for 6895 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Waiting for 7071 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Waiting for 7684 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 20 Jul 2007 23:34
Waiting for 7804 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 19 Jul 2007 23:26
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Update comment by auto on 19 Jul 2007 11:46
Waiting for 8167 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 19 Jul 2007 07:25
Waiting for 8211 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 19 Jul 2007 03:44
Waiting for 8242 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 23:06
Waiting for 8273 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 19:23
Waiting for 8325 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 15:18
Waiting for 8374 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 11:41
Waiting for 8395 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 07:39
Waiting for 8394 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 02:59
Waiting for 8379 new domains (example : 1g1yB02) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 22:16
Waiting for 8343 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 16:21
Waiting for 8284 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 11:22
Waiting for 8221 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 07:27
Waiting for 8152 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 03:28
Waiting for 8083 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 23:08
Waiting for 8009 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 19:35
Waiting for 7928 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 15:51
Waiting for 7841 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 11:08
Waiting for 7749 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 06:48
Waiting for 7631 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 04:53
Waiting for 7496 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 01:31
Waiting for 7325 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 23:04
Waiting for 7146 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 19:51
Waiting for 6928 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 15:43
Waiting for 6694 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 12:07
Waiting for 6438 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 07:33
Waiting for 6152 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 03:37
Waiting for 5796 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 23:24
Waiting for 5384 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 21:24
Waiting for 4906 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 18:15
Waiting for 4380 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 13:07
Waiting for 3708 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 06:14
Waiting for 2933 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 13 Jul 2007 19:05
Waiting for 1961 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Flow stage update by auto on 13 Jul 2007 18:51
No satisfactory AssignClose result found.
Flow stage update by auto on 13 Jul 2007 18:43
No in_process hits for Domain "2hmaA02" ready to be processed
Flow stage update by auto on 13 Jul 2007 18:43
NW result present for Domain "2hmaA02"
Flow stage update by auto on 07 Jul 2007 20:00
All required files are present for Domain "2hmaA02"
Flow stage update by auto on 06 Jul 2007 14:25
Beginning processing for Domain "2hmaA02"
Insertion by cuff on 06 Jul 2007 13:51
nice chopping
