CATH Domain: 2hlcA02 XML data for domain: 2hlcA02

Molscript image for 2hlcA02
2hlcA02
PDB coordinates for domain 2hlcA02

PDB 2hlc, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.10 Thrombin, subunit H
2.40.10.10 Trypsin-like serine proteases Gene3D
2.40.10.10.57
2.40.10.10.57.1
2.40.10.10.57.1.1
2.40.10.10.57.1.1.1
2.40.10.10.57.1.1.1.1

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Segment boundaries for domain 2hlcA02

Chopping figure for domain 2hlcA02
DomainStart PDB ResidueStop PDB Residue
2hlcA01 30 121
2hlcA01 235 246
2hlcA02 16 29
2hlcA02 122 234

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 2.40.10.10.57.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2asuB01 88.44 Hepatocyte growth factor-like proteinHomo sapiens 2.40.10.10 122 22 92 1.85 2.01
1q3xA02 88.36 Serine-type endopeptidase activityHomo sapiensMannan-binding lectin serine protease 2Calcium-dependent protein bindingComplement activation, lectin pathway 2.40.10.10 137 30 91 2.10 2.30
1si5H01 86.51 Pathways in cancerHepatocyte growth factorEpithelial to mesenchymal transitionRenal cell carcinomaCytokine-cytokine receptor interaction 2.40.10.10 119 26 90 2.24 2.48
1dleB02 79.63 Complement factor BComplement bindingHomo sapiensComponent factor B [EC:3.4.21.47]Complement and coagulation cascades 2.40.10.10 142 14 72 2.64 3.64
2qf3B02 79.37 Protease degSProtein bindingSerine protease DegS [EC:3.4.21.-]Escherichia coli K-12 2.40.10.10 103 11 73 2.89 3.92
1lcyA02 78.17 Serine-type endopeptidase activityHtrA serine peptidase 2 [EC:3.4.21.108]Endoplasmic reticulum membraneParkinson's diseaseNucleus 2.40.10.10 84 19 65 3.13 4.81
2o8mA02 76.58 Genome polyproteinHepatitis C virus subtype 1a 2.40.10.10 87 10 62 3.01 4.80
1svpA02 72.61 Sindbis virusStructural polyprotein 2.40.10.10 86 6 57 2.73 4.78
3fanA02 71.82 Porcine reproductive and respiratory syndrome virusNon-structural protein 2.40.10.10 69 14 51 2.51 4.87
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2hlcA02
IINGYEAYTGLFPYRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDG
KSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2hlcA02
IINGYEAYTGLFPYRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDG
KSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:54

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"