Classification merge by cuff on 12 Nov 2010 19:13
COMMENT: merge fold and superfamily FINAL: merge: 1.10.164.10 --> 1.10.150.240
CATH Domain: 2hdoA02
2hdoA02
PDB 2hdo, Chain A, Domain 2
Segment boundaries for domain 2hdoA02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 2hdoA01 | 2 | 16 |
| 2hdoA01 | 81 | 207 |
| 2hdoA02 | 17 | 80 |
Structural Neighbourhood (8 entries)
There are 8 matching structural neighberhood comparisons for CATH ID 1.10.150.240.13.1.1.1.1 (SIMAX score < 5)
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Displaying entries 1 to 8 (page 1 of 1)
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Displaying entries 1 to 8 (page 1 of 1)
Domain History Events (216)
Domain assigned by cuff on 07 Feb 2008 13:12
same superfamily
Domain assignment manual match h by cuff on 07 Feb 2008 13:10
same superfamily. SCOP concurs
Domain assignment manual match t by tronnberg on 05 Sep 2007 12:15
SSAP: 83.98 OV: 75 SEQ: 10. Similar linkage and structure. Functionally different. I think that 2fi1A02 (TBA) should be assign to the same topology family.
Homcheck review by tronnberg on 05 Sep 2007 12:15
SSAP: 83.98 OV: 75 SEQ: 10. Similar linkage and structure. Functionally different. I think that 2fi1A02 (TBA) should be assign to the same topology family.
Flow stage update by tronnberg on 05 Sep 2007 12:15
SSAP: 83.98 OV: 75 SEQ: 10. Similar linkage and structure. Functionally different. I think that 2fi1A02 (TBA) should be assign to the same topology family.
Domain assignment manual match t by tronnberg on 28 Aug 2007 14:45
SSAP= 85, OV= 89, Seq sim= 20. Very similar linkage.
Homcheck allotment by tronnberg on 28 Aug 2007 14:41
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by tronnberg on 28 Aug 2007 14:41
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by auto on 24 Aug 2007 23:36
Domain "2hdoA02" SCOP scan with no results - no SCOP mapping
Domain scan scop cath by auto on 24 Aug 2007 23:35
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2hdoA02
Flow stage update by auto on 24 Aug 2007 23:04
Retrieved PRC_PFAMCATH results for job ID SID3801393690056330 and results inserted.
Domain scan prc pfamcath by auto on 24 Aug 2007 23:03
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 0 results for 2hdoA02
Update comment by auto on 24 Aug 2007 19:44
PRC_PFAMCATH job SID3801393690056330 is not yet finished.
Prc pfamcath submit by auto on 24 Aug 2007 19:41
The entry "2hdoA02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 24 Aug 2007 19:41
The entry "2hdoA02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 24 Aug 2007 18:48
Retrieved SSAP results for job ID SID1670990123972672 and results inserted.
Domain scan ssap cath by auto on 24 Aug 2007 18:45
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 1384 results for 2hdoA02
Update comment by auto on 23 Aug 2007 22:41
SSAP job SID1670990123972672 is not yet finished.
Ssap cath submit by auto on 23 Aug 2007 22:29
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 23 Aug 2007 22:29
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 23 Aug 2007 19:32
Giving up on SSAP job SID5452277176532192 because submission time of Tue Aug 21 10:49:26 2007 is more than 172800 seconds older than current time (Thu Aug 23 19:32:01 2007).
Update comment by auto on 21 Aug 2007 11:32
SSAP job SID5452277176532192 is not yet finished.
Ssap cath submit by auto on 21 Aug 2007 10:49
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 21 Aug 2007 10:49
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 21 Aug 2007 08:10
Giving up on SSAP job SID2251268580514668 because submission time of Sun Aug 19 07:26:40 2007 is more than 172800 seconds older than current time (Tue Aug 21 08:10:07 2007).
Update comment by auto on 19 Aug 2007 08:21
SSAP job SID2251268580514668 is not yet finished.
Ssap cath submit by auto on 19 Aug 2007 07:26
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 19 Aug 2007 07:26
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 19 Aug 2007 03:28
Giving up on SSAP job SID9184565533392752 because submission time of Thu Aug 16 23:19:34 2007 is more than 172800 seconds older than current time (Sun Aug 19 03:28:27 2007).
Update comment by auto on 17 Aug 2007 00:29
SSAP job SID9184565533392752 is not yet finished.
Flow stage update by auto on 16 Aug 2007 23:19
The entry "2hdoA02" has been submitted to the SSAP webservice.
Ssap cath submit by auto on 16 Aug 2007 23:19
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 16 Aug 2007 18:26
Giving up on SSAP job SID5751361329937328 because submission time of Tue Aug 14 08:52:20 2007 is more than 172800 seconds older than current time (Thu Aug 16 18:26:51 2007).
Update comment by auto on 14 Aug 2007 10:27
SSAP job SID5751361329937328 is not yet finished.
Ssap cath submit by auto on 14 Aug 2007 08:52
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 14 Aug 2007 08:52
The entry "2hdoA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 14 Aug 2007 05:14
Retrieved PRC results for job ID SID8411295949177268 and inserted them into the database.
Domain scan prc cath by auto on 14 Aug 2007 05:13
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 1 results for 2hdoA02
Prc cath submit by auto on 13 Aug 2007 10:16
The entry "2hdoA02" has been submitted to the PRC webservice.
Flow stage update by auto on 13 Aug 2007 10:16
The entry "2hdoA02" has been submitted to the PRC webservice.
Flow stage update by auto on 13 Aug 2007 06:45
Retrieved HMM(SAM) results for job ID SID0474963868565309 and inserted them into the database.
Domain scan sam cath by auto on 13 Aug 2007 06:44
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2hdoA02
Update comment by auto on 12 Aug 2007 12:59
HMM(SAM) job SID0474963868565309 is not yet finished.
Sam cath submit by auto on 12 Aug 2007 11:41
The entry "2hdoA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 12 Aug 2007 11:41
The entry "2hdoA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 12 Aug 2007 02:04
Retrieved "2hdoA02" CATHEDRAL results for job ID SID6591531112620640 and inserted them into the database.
Domain scan cathedral cath by auto on 12 Aug 2007 02:03
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 70 results for 2hdoA02
Update comment by auto on 11 Aug 2007 05:44
"2hdoA02" CATHEDRAL job SID6591531112620640 is not yet finished.
Flow stage update by auto on 11 Aug 2007 04:06
The entry "2hdoA02" has been submitted to the CATHEDRAL webservice.
Cathedral cath submit by auto on 11 Aug 2007 04:06
The entry "2hdoA02" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 11 Aug 2007 01:59
ScanList with 9778 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2hdoA02.scanlist" for "2hdoA02"
Write scan list by auto on 11 Aug 2007 01:59
Writing ScanList containing 9778 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2hdoA02.scanlist" for domain "2hdoA02"
Update comment by auto on 10 Aug 2007 14:31
Waiting for 984 new domains (example : 1h4uA00) to be processed so that they can be scanned against too.
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Waiting for 8394 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 02:57
Waiting for 8379 new domains (example : 1g1yB02) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 22:13
Waiting for 8343 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 16:17
Waiting for 8284 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 11:18
Waiting for 8221 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 07:24
Waiting for 8152 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 03:25
Waiting for 8083 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 23:07
Waiting for 8009 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 19:32
Waiting for 7928 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 15:48
Waiting for 7841 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 11:07
Waiting for 7749 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 06:47
Waiting for 7631 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 04:52
Waiting for 7496 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 01:29
Waiting for 7325 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 23:02
Waiting for 7146 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 19:49
Waiting for 6928 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 15:41
Waiting for 6694 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 12:06
Waiting for 6438 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 07:32
Waiting for 6152 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 03:36
Waiting for 5796 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 23:23
Waiting for 5384 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 21:23
Waiting for 4906 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 18:14
Waiting for 4380 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 13:06
Waiting for 3708 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 06:13
Waiting for 2933 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 13 Jul 2007 19:04
Waiting for 1961 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Flow stage update by auto on 13 Jul 2007 18:49
No satisfactory AssignClose result found.
Flow stage update by auto on 13 Jul 2007 18:43
No in_process hits for Domain "2hdoA02" ready to be processed
Flow stage update by auto on 13 Jul 2007 18:43
NW result present for Domain "2hdoA02"
Flow stage update by auto on 07 Jul 2007 20:00
All required files are present for Domain "2hdoA02"
Flow stage update by auto on 06 Jul 2007 14:25
Beginning processing for Domain "2hdoA02"
Insertion by cuff on 06 Jul 2007 12:33
nice chopping
