Domain assigned by cuff on 04 Feb 2008 14:08
evidence suggests same superfamily
CATH Domain: 2hcfA02
2hcfA02
PDB 2hcf, Chain A, Domain 2
Segment boundaries for domain 2hcfA02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 2hcfA01 | 2 | 18 |
| 2hcfA01 | 87 | 229 |
| 2hcfA02 | 19 | 86 |
Structural Neighbourhood (4 entries)
There are 4 matching structural neighberhood comparisons for CATH ID 1.10.150.240.17.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 4 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
 |
2fdrA02 | 82.42 | 1.10.150.240 | 64 | 12 | 85 | 3.90 | 4.54 | |
|
2nyvA02 | 79.14 | 1.10.150.240 | 64 | 9 | 87 | 3.48 | 3.98 | |
|
1swvA02 | 78.20 | 1.10.150.240 | 78 | 7 | 79 | 3.24 | 4.08 | |
|
2b0cA02 | 76.49 | 1.10.150.240 | 66 | 9 | 75 | 3.73 | 4.92 |
[1]
Displaying entries 1 to 4 (page 1 of 1)
Domain History Events (218)
Domain assignment manual match h by tronnberg on 26 Nov 2007 09:17
Same superfamily
Homcheck review by tronnberg on 26 Nov 2007 09:17
Same superfamily
Flow stage update by tronnberg on 26 Nov 2007 09:17
Same superfamily
Homcheck return by cuff on 19 Nov 2007 11:08
needs to be in same superfamily
Flow stage update by cuff on 19 Nov 2007 11:08
needs to be in same superfamily
Domain assignment manual match t by tronnberg on 28 Aug 2007 12:46
SSAP= 82, OV= 90, Seq sim= 11. Similar linkage.
Homcheck review by tronnberg on 28 Aug 2007 12:46
SSAP= 82, OV= 90, Seq sim= 11. Similar linkage.
Flow stage update by tronnberg on 28 Aug 2007 12:46
SSAP= 82, OV= 90, Seq sim= 11. Similar linkage.
Homcheck allotment by tronnberg on 28 Aug 2007 12:40
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by tronnberg on 28 Aug 2007 12:40
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by auto on 24 Aug 2007 23:35
Domain "2hcfA02" SCOP scan with no results - no SCOP mapping
Domain scan scop cath by auto on 24 Aug 2007 23:34
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2hcfA02
Flow stage update by auto on 24 Aug 2007 23:03
Retrieved PRC_PFAMCATH results for job ID SID5481480181843816 and results inserted.
Domain scan prc pfamcath by auto on 24 Aug 2007 23:03
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 0 results for 2hcfA02
Update comment by auto on 24 Aug 2007 15:07
PRC_PFAMCATH job SID5481480181843816 is not yet finished.
Prc pfamcath submit by auto on 24 Aug 2007 15:04
The entry "2hcfA02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 24 Aug 2007 15:04
The entry "2hcfA02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 24 Aug 2007 14:25
Retrieved SSAP results for job ID SID5124340053306224 and results inserted.
Domain scan ssap cath by auto on 24 Aug 2007 14:22
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 2317 results for 2hcfA02
Update comment by auto on 23 Aug 2007 22:41
SSAP job SID5124340053306224 is not yet finished.
Flow stage update by auto on 23 Aug 2007 22:29
The entry "2hcfA02" has been submitted to the SSAP webservice.
Ssap cath submit by auto on 23 Aug 2007 22:29
The entry "2hcfA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 23 Aug 2007 19:31
Giving up on SSAP job SID9852757034840724 because submission time of Tue Aug 21 10:49:06 2007 is more than 172800 seconds older than current time (Thu Aug 23 19:31:43 2007).
Update comment by auto on 21 Aug 2007 11:31
SSAP job SID9852757034840724 is not yet finished.
Ssap cath submit by auto on 21 Aug 2007 10:49
The entry "2hcfA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 21 Aug 2007 10:49
The entry "2hcfA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 21 Aug 2007 08:09
Giving up on SSAP job SID9446692282438604 because submission time of Sun Aug 19 07:26:10 2007 is more than 172800 seconds older than current time (Tue Aug 21 08:09:47 2007).
Update comment by auto on 19 Aug 2007 08:21
SSAP job SID9446692282438604 is not yet finished.
Flow stage update by auto on 19 Aug 2007 07:26
The entry "2hcfA02" has been submitted to the SSAP webservice.
Ssap cath submit by auto on 19 Aug 2007 07:26
The entry "2hcfA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 19 Aug 2007 03:28
Giving up on SSAP job SID9871543616965392 because submission time of Thu Aug 16 23:19:09 2007 is more than 172800 seconds older than current time (Sun Aug 19 03:28:04 2007).
Update comment by auto on 17 Aug 2007 00:28
SSAP job SID9871543616965392 is not yet finished.
Ssap cath submit by auto on 16 Aug 2007 23:19
The entry "2hcfA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 16 Aug 2007 23:19
The entry "2hcfA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 16 Aug 2007 18:26
Giving up on SSAP job SID0720282889644608 because submission time of Tue Aug 14 08:51:49 2007 is more than 172800 seconds older than current time (Thu Aug 16 18:26:30 2007).
Update comment by auto on 14 Aug 2007 10:27
SSAP job SID0720282889644608 is not yet finished.
Flow stage update by auto on 14 Aug 2007 08:51
The entry "2hcfA02" has been submitted to the SSAP webservice.
Ssap cath submit by auto on 14 Aug 2007 08:51
The entry "2hcfA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 14 Aug 2007 05:10
Retrieved PRC results for job ID SID7103642101519680 and inserted them into the database.
Domain scan prc cath by auto on 14 Aug 2007 05:09
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 1 results for 2hcfA02
Flow stage update by auto on 13 Aug 2007 10:15
The entry "2hcfA02" has been submitted to the PRC webservice.
Prc cath submit by auto on 13 Aug 2007 10:15
The entry "2hcfA02" has been submitted to the PRC webservice.
Flow stage update by auto on 13 Aug 2007 06:42
Retrieved HMM(SAM) results for job ID SID4427772551553840 and inserted them into the database.
Domain scan sam cath by auto on 13 Aug 2007 06:41
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2hcfA02
Update comment by auto on 12 Aug 2007 12:59
HMM(SAM) job SID4427772551553840 is not yet finished.
Sam cath submit by auto on 12 Aug 2007 11:40
The entry "2hcfA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 12 Aug 2007 11:40
The entry "2hcfA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 12 Aug 2007 01:59
Retrieved "2hcfA02" CATHEDRAL results for job ID SID0971520652729056 and inserted them into the database.
Domain scan cathedral cath by auto on 12 Aug 2007 01:58
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 61 results for 2hcfA02
Update comment by auto on 11 Aug 2007 05:43
"2hcfA02" CATHEDRAL job SID0971520652729056 is not yet finished.
Flow stage update by auto on 11 Aug 2007 04:05
The entry "2hcfA02" has been submitted to the CATHEDRAL webservice.
Cathedral cath submit by auto on 11 Aug 2007 04:05
The entry "2hcfA02" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 11 Aug 2007 01:58
ScanList with 9778 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2hcfA02.scanlist" for "2hcfA02"
Write scan list by auto on 11 Aug 2007 01:58
Writing ScanList containing 9778 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2hcfA02.scanlist" for domain "2hcfA02"
Update comment by auto on 10 Aug 2007 14:31
Waiting for 984 new domains (example : 1h4uA00) to be processed so that they can be scanned against too.
Update comment by auto on 10 Aug 2007 10:31
Waiting for 1052 new domains (example : 1h4uA00) to be processed so that they can be scanned against too.
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Update comment by auto on 08 Aug 2007 22:32
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Update comment by auto on 08 Aug 2007 06:48
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Update comment by auto on 07 Aug 2007 22:43
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Update comment by auto on 07 Aug 2007 19:30
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Update comment by auto on 04 Aug 2007 22:48
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Update comment by auto on 04 Aug 2007 19:04
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Update comment by auto on 03 Aug 2007 22:53
Waiting for 3216 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 03 Aug 2007 19:49
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Update comment by auto on 03 Aug 2007 15:45
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Update comment by auto on 03 Aug 2007 10:57
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Update comment by auto on 03 Aug 2007 06:59
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Update comment by auto on 03 Aug 2007 02:58
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Update comment by auto on 02 Aug 2007 22:44
Waiting for 3254 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 19:27
Waiting for 3282 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 15:20
Waiting for 3339 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 11:01
Waiting for 3395 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Aug 2007 07:00
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Update comment by auto on 02 Aug 2007 02:59
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Update comment by auto on 01 Aug 2007 22:41
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Update comment by auto on 01 Aug 2007 19:30
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Update comment by auto on 01 Aug 2007 15:01
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Update comment by auto on 01 Aug 2007 10:52
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Update comment by auto on 01 Aug 2007 06:54
Waiting for 3884 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Aug 2007 02:59
Waiting for 3939 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 22:40
Waiting for 3997 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 18:58
Waiting for 4076 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 14:49
Waiting for 4166 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 11:07
Waiting for 4233 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 07:22
Waiting for 4307 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Jul 2007 03:27
Waiting for 4386 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 23:29
Waiting for 4468 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 19:51
Waiting for 4553 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 16:24
Waiting for 4605 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 10:02
Waiting for 4715 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Jul 2007 02:29
Waiting for 4857 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Jul 2007 11:31
Waiting for 4966 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Jul 2007 07:30
Waiting for 5043 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Jul 2007 03:29
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Update comment by auto on 29 Jul 2007 00:38
Waiting for 5134 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Jul 2007 19:11
Waiting for 5205 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Jul 2007 15:05
Waiting for 5292 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 27 Jul 2007 22:48
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Update comment by auto on 27 Jul 2007 15:00
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Update comment by auto on 27 Jul 2007 06:57
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Update comment by auto on 27 Jul 2007 02:49
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Update comment by auto on 26 Jul 2007 23:15
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Update comment by auto on 26 Jul 2007 19:37
Waiting for 6072 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 26 Jul 2007 16:00
Waiting for 6103 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 26 Jul 2007 11:32
Waiting for 6154 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 26 Jul 2007 07:35
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Update comment by auto on 26 Jul 2007 04:46
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Update comment by auto on 26 Jul 2007 00:59
Waiting for 6282 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 25 Jul 2007 15:33
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Update comment by auto on 25 Jul 2007 11:16
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Waiting for 6895 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
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Update comment by auto on 21 Jul 2007 03:56
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Update comment by auto on 20 Jul 2007 23:32
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Update comment by auto on 19 Jul 2007 23:23
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Update comment by auto on 19 Jul 2007 07:23
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Update comment by auto on 19 Jul 2007 03:41
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Update comment by auto on 18 Jul 2007 23:04
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Update comment by auto on 18 Jul 2007 19:21
Waiting for 8325 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 15:16
Waiting for 8374 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 11:38
Waiting for 8395 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 07:35
Waiting for 8394 new domains (example : 1gviA01) to be processed so that they can be scanned against too.
Update comment by auto on 18 Jul 2007 02:57
Waiting for 8379 new domains (example : 1g1yB02) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 22:13
Waiting for 8343 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 16:17
Waiting for 8284 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 11:18
Waiting for 8221 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 07:24
Waiting for 8152 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 17 Jul 2007 03:25
Waiting for 8083 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 23:07
Waiting for 8009 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 19:32
Waiting for 7928 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 15:48
Waiting for 7841 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 11:06
Waiting for 7749 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 06:47
Waiting for 7631 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 04:51
Waiting for 7496 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 16 Jul 2007 01:29
Waiting for 7325 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 23:02
Waiting for 7146 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 19:49
Waiting for 6928 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 15:41
Waiting for 6694 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 12:05
Waiting for 6438 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 07:32
Waiting for 6152 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 15 Jul 2007 03:36
Waiting for 5796 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 23:22
Waiting for 5384 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 21:23
Waiting for 4906 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 18:13
Waiting for 4380 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 13:06
Waiting for 3708 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 14 Jul 2007 06:13
Waiting for 2933 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Update comment by auto on 13 Jul 2007 19:04
Waiting for 1961 new domains (example : 1ai6A01) to be processed so that they can be scanned against too.
Flow stage update by auto on 13 Jul 2007 18:49
No satisfactory AssignClose result found.
Flow stage update by auto on 13 Jul 2007 18:43
No in_process hits for Domain "2hcfA02" ready to be processed
Flow stage update by auto on 13 Jul 2007 18:43
NW result present for Domain "2hcfA02"
Flow stage update by auto on 07 Jul 2007 20:00
All required files are present for Domain "2hcfA02"
Flow stage update by auto on 06 Jul 2007 14:25
Beginning processing for Domain "2hcfA02"
Insertion by cuff on 06 Jul 2007 13:31
nice chopping
