CATH Domain: 2h8oA00 XML data for domain: 2h8oA00

Molscript image for 2h8oA00
2h8oA00
PDB coordinates for domain 2h8oA00

PDB 2h8o, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.600 Farnesyl Diphosphate Synthase
1.10.600.10 Farnesyl Diphosphate Synthase Gene3D
1.10.600.10.2
1.10.600.10.2.1
1.10.600.10.2.1.1
1.10.600.10.2.1.1.1
1.10.600.10.2.1.1.1.1

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Segment boundaries for domain 2h8oA00

Chopping figure for domain 2h8oA00
DomainStart PDB ResidueStop PDB Residue
2h8oA00 33 332

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.600.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wy0A00 85.96 Dimethylallyltranstransferase [EC:2.5.1.1]Terpenoid backbone biosynthesisPyrococcus horikoshiiGeranyltranstransferase [EC:2.5.1.10]Metabolic pathways 1.10.600.10 327 33 81 1.91 2.33
1v4eA00 83.88 Terpenoid backbone biosynthesisThermotoga maritimaOctaprenyl-diphosphate synthase [EC:2.5.1.-]Octoprenyl-diphosphate synthase, putative 1.10.600.10 280 19 83 2.57 3.08
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2h8oA00
DAQMTNFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLHVGA
ALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIG
GMAGGQALDLAAEKKAPDEDGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTKGTL
VALRGEAWAREKLQEQVAEASELLAPYGEKAAILIAAARFIAE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2h8oA00
DAQMTNFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLHVGA
ALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIG
GMAGGQALDLAAEKKAPDEDGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADAA
TMGKATGKDAARGKGTLVALRGEAWAREKLQEQVAEASELLAPYGEKAAILIAAARFIAERKS
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 07 Dec 2006 09:22

Assigning to "1.10.600.10" based on similarity with "1rqiA00"

Flow stage update by auto on 07 Dec 2006 09:19

No in_process hits for Domain "2h8oA00" ready to be processed

Flow stage update by auto on 07 Dec 2006 09:19

NW result present for Domain "2h8oA00"

Flow stage update by auto on 06 Dec 2006 17:23

All required files are present for Domain "2h8oA00"

Flow stage update by auto on 05 Dec 2006 17:30

Beginning processing for Domain "2h8oA00"

Insertion by cuff on 05 Dec 2006 16:52

decent batch of choppings