CATH Domain: 2gykB00 XML data for domain: 2gykB00

Molscript image for 2gykB00
2gykB00
PDB coordinates for domain 2gykB00

PDB 2gyk, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.540 Colicin E7 immunity protein; Chain B, fragment: Endonuclease domain
3.90.540.10 Colicin e7 immunity protein. Chain B Gene3D
3.90.540.10.1
3.90.540.10.1.1
3.90.540.10.1.1.1
3.90.540.10.1.1.1.1
3.90.540.10.1.1.1.1.1

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Segment boundaries for domain 2gykB00

Chopping figure for domain 2gykB00
DomainStart PDB ResidueStop PDB Residue
2gykB00 4 133

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|2gykB00
KRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGY
SPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIHRG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2gykB00
MESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVS
KGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIHRGK
BLAST against CATH

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Domain History Events (7)

Domain assigned by auto on 14 Aug 2007 23:12

Assigning to "3.90.540.10" based on similarity with "1emvB00"

Flow stage update by auto on 14 Aug 2007 22:50

No in_process hits for Domain "2gykB00" ready to be processed

Flow stage update by auto on 27 Jul 2007 06:26

Domain "2gykB00" hits Domain "2gykF00" (100% over 100%) which is currently in process

Flow stage update by auto on 27 Jul 2007 06:26

NW result present for Domain "2gykB00"

Flow stage update by auto on 14 Jul 2007 06:02

All required files are present for Domain "2gykB00"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2gykB00"

Insertion by auto on 13 Jul 2007 08:02

Final ChopClose added based on similarity with "1emvB"